Detailed information of g1400.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_012557946.1, neurobeachin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9ESE1Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1
P50851Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens OX=9606 GN=LRBA PE=1 SV=4
Q9EPN1Neurobeachin OS=Mus musculus OX=10090 GN=Nbea PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20146NRFNose resistant-to-fluoxetine protein, N-terminal domainDomainInterproscan
PF15964CCCAPCentrosomal colon cancer autoantigen protein familyCoiled-coilInterproscan
PF20426NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan
PF14844PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF08669GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan
PF01571GCV_TAminomethyltransferase folate-binding domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006621DomainNose resistant-to-fluoxetine protein, N-terminalInterproscan
IPR038911FamilySodium channel and clathrin linker 1Interproscan
IPR031887FamilySerologically defined colon cancer antigen 8Interproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR050865FamilyBEACH Domain-ContainingInterproscan
IPR046851DomainNeurobeachin, beta-propeller domainInterproscan
IPR023362DomainPH-BEACH domainInterproscan
IPR000409DomainBEACH domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR001404FamilyHeat shock protein Hsp90 familyInterproscan
IPR019805Conserved_siteHeat shock protein Hsp90, conserved siteInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR020575DomainHeat shock protein Hsp90, N-terminalInterproscan
IPR028896FamilyAminomethyltransferase-likeInterproscan
IPR029043Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR013977DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR006222DomainAminomethyltransferase, folate-binding domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35970SODIUM CHANNEL AND CLATHRIN LINKER 1Interproscan
PTHR13743BEIGE/BEACH-RELATEDInterproscan
PTHR242475-HYDROXYTRYPTAMINE RECEPTORInterproscan
PTHR11528HEAT SHOCK PROTEIN 90 FAMILY MEMBERInterproscan
PTHR43757AMINOMETHYLTRANSFERASEInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0045162Biological Processclustering of voltage-gated sodium channelsInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0007098Biological Processcentrosome cycleInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019901Molecular Functionprotein kinase bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0004993Molecular FunctionG protein-coupled serotonin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007187Biological ProcessG protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messengerInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0048471Cellular Componentperinuclear region of cytoplasmInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

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