Gene detail

Detailed information of g1404.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3158214.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A1L167	Ubiquitin-conjugating enzyme E2Q-like protein 1 OS=Homo sapiens OX=9606 GN=UBE2QL1 PE=1 SV=2
A0PJN4	Ubiquitin-conjugating enzyme E2Q-like protein 1 OS=Mus musculus OX=10090 GN=Ube2ql1 PE=2 SV=2
Q9VM35	Ubiquitin-conjugating enzyme E2Q-like protein CG4502 OS=Drosophila melanogaster OX=7227 GN=CG4502 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E2\|UBC\|UBC
Ubiquitin Family	UBD\|UBC-like\|UBC

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00566	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan
PF16124	RecQ_Zn_bind	RecQ zinc-binding	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00179	UQ_con	Ubiquitin-conjugating enzyme	Domain	Interproscan
PF04832	SOUL	SOUL heme-binding protein	Family	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR000195	Domain	Rab-GAP-TBC domain	Interproscan
IPR035969	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan
IPR032284	Domain	ATP-dependent DNA helicase RecQ, zinc-binding domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004589	Family	DNA helicase, ATP-dependent, RecQ type	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR000608	Domain	Ubiquitin-conjugating enzyme E2	Interproscan
IPR050113	Family	Ubiquitin-conjugating enzyme	Interproscan
IPR006917	Family	SOUL haem-binding protein	Interproscan
IPR011256	Homologous_superfamily	Regulatory factor, effector binding domain superfamily	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22957	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	Interproscan
PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	Interproscan
PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	Interproscan
PTHR11220	HEME-BINDING PROTEIN-RELATED	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006268	Biological Process	DNA unwinding involved in DNA replication	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0009378	Molecular Function	four-way junction helicase activity	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0043138	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20697	GNBP1; gram-negative bacteria-binding protein 1	-	Ubiquitin system	ko04121	deepkoala
K20697	GNBP1; gram-negative bacteria-binding protein 1	-	Toll and Imd signaling pathway	ko04624	deepkoala