Detailed information of g14047.t1 in Montipora capitata

Genomic Location: Sc0000503:217438...218127
NR annotation: PFX16994.1, Zinc finger BED domain-containing protein 1 [Stylophora pistillata]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80WQ9Zinc finger BED domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zbed4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000431 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02892
all species →
zf-BEDBED zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR003656
all species →
DomainZinc finger, BED-typeInterproscan
IPR052717
all species →
FamilyVacuolar processing and transposase activity regulatorsInterproscan
IPR012337
all species →
Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46169
all species →
DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g14047.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP