Genomic Location: chr6Alt:27372082...27386150
NR annotation: XP_044167768.1, RNA-binding protein 5-like isoform X2 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families
| CDS |
| g14053.t2 |
| Transcript |
| chr6Alt.g14053.t2 |
| Protein |
| chr6Alt.g14053.t2 |
| UniProt accession | Description |
|---|---|
| A4IGK4 | RNA-binding protein 5 OS=Xenopus tropicalis OX=8364 GN=rbm5 PE=2 SV=1 |
| Q6DDU9 | RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1 |
| A0JMV4 | RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17780 all species → | OCRE | OCRE domain | Domain | Interproscan |
| PF00076 all species → | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR041591 all species → | Domain | OCRE domain | Interproscan |
| IPR001876 all species → | Domain | Zinc finger, RanBP2-type | Interproscan |
| IPR036443 all species → | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13948 all species → | RNA-BINDING PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0000398 all species → | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
g14053.t2.
