Detailed information of g1407.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH1256867.1, TGM1 [Branchiostoma lanceolatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q05187Hemocyte protein-glutamine gamma-glutamyltransferase OS=Tachypleus tridentatus OX=6853 PE=1 SV=1
Q9JLF6Protein-glutamine gamma-glutamyltransferase K OS=Mus musculus OX=10090 GN=Tgm1 PE=1 SV=2
P23606Protein-glutamine gamma-glutamyltransferase K OS=Rattus norvegicus OX=10116 GN=Tgm1 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyTEA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF01841Transglut_coreTransglutaminase-like superfamilyFamilyInterproscan
PF01285TEATEA/ATTS domainDomainInterproscan
PF02798GST_NGlutathione S-transferase, N-terminal domainDomainInterproscan
PF14497GST_C_3Glutathione S-transferase, C-terminal domainDomainInterproscan
PF01699Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF17832Pre-PUAPre-PUA-like domainDomainInterproscan
PF01472PUAPUA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036238Homologous_superfamilyTransglutaminase, C-terminal domain superfamilyInterproscan
IPR050779FamilyProtein-glutamine gamma-glutamyltransferasesInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002931DomainTransglutaminase-likeInterproscan
IPR036985Homologous_superfamilyTransglutaminase-like superfamilyInterproscan
IPR000818DomainTEA/ATTS domainInterproscan
IPR038096Homologous_superfamilyTEA/ATTS domain superfamilyInterproscan
IPR050937FamilyTEC1/TEAD Transcription FactorInterproscan
IPR040079FamilyGlutathione transferase familyInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR050213FamilyGlutathione S-transferase superfamilyInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR010987DomainGlutathione S-transferase, C-terminal-likeInterproscan
IPR004046DomainGlutathione S-transferase, C-terminalInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR004481FamilySodium/potassium/calcium exchangerInterproscan
IPR044880Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR004837DomainSodium/calcium exchanger membrane regionInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR016437FamilyMCT-1/Tma20Interproscan
IPR041366DomainPre-PUA domainInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR002478DomainPUA domainInterproscan
IPR004521DomainUncharacterised domain CHP00451Interproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR11590PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASEInterproscan
PTHR11834TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATEDInterproscan
PTHR11571GLUTATHIONE S-TRANSFERASEInterproscan
PTHR10846SODIUM/POTASSIUM/CALCIUM EXCHANGERInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR36453SECRETED PROTEIN-RELATEDInterproscan
PTHR22798MCT-1 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003810Molecular Functionprotein-glutamine gamma-glutamyltransferase activityInterproscan
GO:0018149Biological Processpeptide cross-linkingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0004364Molecular Functionglutathione transferase activityInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006874Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008273Molecular Functioncalcium, potassium:sodium antiporter activityInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0001731Biological Processformation of translation preinitiation complexInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07575MCTS, TMA20; malignant T-cell-amplified sequence-Messenger RNA biogenesisko03019deepkoala

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