Gene detail

Detailed information of g14095.t1 in Montipora capitata

Genomic Location: Sc0000507:48642...62155
NR annotation: XP_015763248.1, PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 16-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q08D69	Mediator of RNA polymerase II transcription subunit 16 OS=Xenopus tropicalis OX=8364 GN=med16 PE=2 SV=1
Q6PGF3	Mediator of RNA polymerase II transcription subunit 16 OS=Mus musculus OX=10090 GN=Med16 PE=1 SV=2
Q9Y2X0	Mediator of RNA polymerase II transcription subunit 16 OS=Homo sapiens OX=9606 GN=MED16 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20719	Med16_C	Mediator complex subunit 16, C-terminal	Domain	Interproscan
PF20718	Med16_bridge	Mediator complex subunit 16, central helical bridge	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048338	Family	Mediator complex, subunit Med16	Interproscan
IPR048339	Domain	Mediator complex subunit 16, C-terminal	Interproscan
IPR048616	Domain	Mediator of RNA polymerase II transcription subunit 16 , central helical bridge	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13224	THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016592	Cellular Component	mediator complex	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16912	LAS1; ribosomal biogenesis protein LAS1	-	Ribosome biogenesis	ko03009	deepkoala