Gene detail

Detailed information of g14101.t1.2.67252faa in Paracondylactis sinensis

Genomic Location: Chr_5:1994026...1998593
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

g14101.t1.2.67252faa

TTGTCCTGCAGCAGATTAGGTATATTTGCCTAAAAGCCACTCAATCTTGAGACACCCCATATGGATGCTAATCCCACTAGTGTGATGGAGGTTTGGATATTACCACTCCATTAAAATCATATCAGCCTAAGTTACCTTTTAAATCTTCTGGCACAGCGAAGCAGAAAAGCTGTTTCAGAGAAATGCAGAGCCTGTTTTTCATCTTGCTGGATTAGATGTAACAATTGTCAAGGTAAGAGACTTTCACTTGCAAGCTCCTCTAGCTGGTATCAATTGCTGCATGACATGTCTCTGTATGCTGTCTAATGTATAGTGTTAGTATGCTCAGCATCATCATCATTGTTCATCACTTTAGACTGATTATGAAGGGCAAATCAAGACACTGATGCAGTATGTGGATCCAAGTATTGATGGGATTATTATTGCAGGAGGAGATGGTACATTACTAGAAGCAGTTACAGGATTACTAAGAAGACCAGACCAGGAACAACTTTCTAAGATTCCATTGGGTGTAATCCCAATTGGTAGCAAAAACTCATCCTATAAAAAGATCTTTGGCAACAGCAAACTAGCCCAAGCAAGAGAGATTGGTGAAGCTGCTATGGCTATAGTCAAAGGCAACACACGTTCTACTGATGTTATGGAAATCAAGGGGGAGGGAGGAAGACCTACATTCGCATTAAGTGGATTACAGTGGGGAGCATTCCGGGATGCTGCTGAAAGCTATGACAAATACTGGATAACTGGTCCATTCAAAAAGAAGATGGCATATATTGCTGCAATATTTCGAAATTGGCCACCAACTCATAGAGCACTTTTATCGTATCCCACTCCACTCACCCCTAATAACACAACTCTGTCAGCAAGTTCTACAAACCAGACTGGTGGCCTGATAGCCTCACGCCTCACTGCACACACCATGGCAAGTGTATTAGATACTACTGATGGTAGTGAAAGTGCTTATTGTACCTTGGATGGATGGGTTCACAACCCATTGGAAACTCTTGGAATGTCGATAGAATTAATTAGAAATATTCAGGGTAAAGCAGCTCTCAGTGTCAGAATGTGGCCTCCTGTTTTGCCAAAAATGGATTTCATAAAAATGGGTTGGAAAATGGAGAAAAATAGCCACCAATCTGCTGGAGAACCAGGTTTTGTTTCAGAAACCTGTAAATGTATTGAAGTACAAGAACTTAAGTTGGAACCAAGGGATGAGGAAGTTTCATGGTTCAGTATTGATGGAGAGCCTTTTGATGCTCGGCCTATCCACATCACAGTACACCAAGACAAGTTGCAGGTCTTTTCTGGCTAAGAAGGTTAACATCAACAGGCACTGGATACCAAGCTAGATCCAAAATCTGGTTCACATTGAACATTGTACTGAGATATGTACTGCTGGTTAACAATGTCTGTCTTTTTCACACCTAGTTAATAAAATTAGCTTTTGAACGAAGCTTCTGATTGGTTGTACTAAAAAGAACAATAAACAAAAGAAACAACACAGTGTGAAAGGTAGATAACACACTCCTTAATCCACTCATTCCAGAAGCTTCATTCTAATGGTAGGAACAGACTCCAATACTGACACTGCGGATATAGCTAAAGATTATACTACCATTTGTGAGCAACTTTCAAGTTTTAACTTTTTTACCGGTTGTTTCAAGTTTCAAACAAGATGTTGTCTGATGTTGGTGGCATTATTTAGAAGTGCCCAGGAGTAAGTTTTGAAAAATGCTTTCTACAGAAGATTGATTTTATAAAAAGACTGTAGAGTCAGTAGATACTGTCTTTTCTTCATCAATATTCTGCAGAAAGCATTTTAAGTTGCACACGAATGGTAGTATGCTACTGTGAACCAGGCATAACTTGAAAAAATATGAAAAACAAGAAGCCGAAGCCACATTTTACAAAATAAGAAATTCAATATTTATTTTGTTTTAAATTCACGTGTCTATTGGGTTTTGAGGTACAATACTCCAGTTTTGAGATCCCAGTTAATGACCGCTACCACACATAGCTGATACATTTTTACAGGGTTAGCCTCGACTGCACATAATATATTCATGATTACCAGAACAACTCATGGGAATCCAAAGAATTTTGCTTTGTTCAAGTTCAACAATTCTTGCTTTCTCATTTGCATTTACAAACATTTCATGCACAATCAAGACTAACCCTGTGCAAATGCATCTGCAGTAAAGCATTTCGACTGTCATTTTCGAATTTGAAAAAGGTATATAATACATAAGATACAAATACTGATTTTGTTTGGAAATATGATTTGAAGCTCACTGTAAAAAATATCTCTTCTTTGTCGGGTTAATTAATTAAAAACTATGAAGCAAAACCTATATTTCAGCTATCTTTAAGGCGAATGTTTTTTCATTAAATTATTCATGCCTGCTTTCAATAAATATTTTTACC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19712 all species →	AGK_C	Acylglycerol kinase C-terminal	Domain	Interproscan
PF00781 all species →	DAGK_cat	Diacylglycerol kinase catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050187 all species →	Family	Lipid Phosphate Formation and Regulation	Interproscan
IPR045579 all species →	Domain	Acylglycerol kinase, C-terminal	Interproscan
IPR001206 all species →	Domain	Diacylglycerol kinase, catalytic domain	Interproscan
IPR016064 all species →	Homologous_superfamily	NAD kinase/diacylglycerol kinase-like domain superfamily	Interproscan
IPR017438 all species →	Homologous_superfamily	Inorganic polyphosphate/ATP-NAD kinase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12358 all species →	SPHINGOSINE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001727 all species →	Molecular Function	lipid kinase activity	Interproscan
GO:0001729 all species →	Molecular Function	ceramide kinase activity	Interproscan
GO:0004143 all species →	Molecular Function	ATP-dependent diacylglycerol kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006665 all species →	Biological Process	sphingolipid metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan
GO:0017050 all species →	Molecular Function	D-erythro-sphingosine kinase activity	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0046512 all species →	Biological Process	sphingosine biosynthetic process	Interproscan
GO:0046513 all species →	Biological Process	ceramide biosynthetic process	Interproscan
GO:0047620 all species →	Molecular Function	acylglycerol kinase activity	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g14101.t1.2.67252faa.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.