Gene detail

Detailed information of g1412.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_031556184.1, proteasome adapter and scaffold protein ECM29-like [Actinia tenebrosa]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5VYK3	Proteasome adapter and scaffold protein ECM29 OS=Homo sapiens OX=9606 GN=ECPAS PE=1 SV=2
Q5R6J0	Proteasome adapter and scaffold protein ECM29 OS=Pongo abelii OX=9601 GN=ECPAS PE=2 SV=3
Q6PDI5	Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000041 (this species only)
Orthogroup (gene family)	OG0000142 (this species only)
Orthogroup (gene family)	OG0000489 (this species only)
Orthogroup (gene family)	OG0001117 (this species only)
Orthogroup (gene family)	OG0002205 (this species only)
Orthogroup (gene family)	OG0002876 (this species only)
Orthogroup (gene family)	OG0002901 (this species only)
Orthogroup (gene family)	OG0004037 (this species only)
Orthogroup (gene family)	OG0024497 (this species only)
Orthogroup (gene family)	OG0029679 (this species only)
Orthogroup (gene family)	OG0059482 (this species only)
Orthogroup (gene family)	OG0080579 (this species only)
Orthogroup (gene family)	OG0171837 (this species only)
Orthogroup (gene family)	OG0172756 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E1\|ThiF\|ThiF · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00053 all species →	Laminin_EGF	Laminin EGF domain	Domain	Interproscan
PF00055 all species →	Laminin_N	Laminin N-terminal (Domain VI)	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF00899 all species →	ThiF	ThiF family	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF06701 all species →	MIB_HERC2	Mib_herc2	Domain	Interproscan
PF17956 all species →	NAPRTase_C	Nicotinate phosphoribosyltransferase C-terminal domain	Domain	Interproscan
PF12775 all species →	AAA_7	P-loop containing dynein motor region	Domain	Interproscan
PF12780 all species →	AAA_8	P-loop containing dynein motor region D4	Domain	Interproscan
PF17857 all species →	AAA_lid_1	AAA+ lid domain	Domain	Interproscan
PF01609 all species →	DDE_Tnp_1	Transposase DDE domain	Domain	Interproscan
PF13001 all species →	Ecm29	Proteasome stabiliser	Family	Interproscan
PF12755 all species →	Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002049 all species →	Domain	Laminin-type EGF domain	Interproscan
IPR050440 all species →	Family	Laminin/Netrin Extracellular Matrix	Interproscan
IPR008211 all species →	Domain	Laminin, N-terminal	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR035985 all species →	Homologous_superfamily	Ubiquitin-activating enzyme	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR000594 all species →	Domain	THIF-type NAD/FAD binding fold	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR010606 all species →	Domain	Mib-herc2	Interproscan
IPR037252 all species →	Homologous_superfamily	Mib/herc2 domain superfamily	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR007229 all species →	Family	Nicotinate phosphoribosyltransferase family	Interproscan
IPR006405 all species →	Family	Nicotinate phosphoribosyltransferase pncB-type	Interproscan
IPR041619 all species →	Domain	Nicotinate phosphoribosyltransferase C-terminal domain	Interproscan
IPR036068 all species →	Homologous_superfamily	Nicotinate phosphoribosyltransferase-like, C-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR024317 all species →	Domain	Dynein heavy chain, AAA module D4	Interproscan
IPR041589 all species →	Domain	Dynein heavy chain 3, AAA+ lid domain	Interproscan
IPR047647 all species →	Family	ISAs1 transposase	Interproscan
IPR051698 all species →	Family	Transposase 11-like	Interproscan
IPR002559 all species →	Domain	Transposase IS4-like domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR024372 all species →	Family	Proteasome component Ecm29	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10574 all species →	NETRIN/LAMININ-RELATED	Interproscan
PTHR19848 all species →	WD40 REPEAT PROTEIN	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR24202 all species →	E3 UBIQUITIN-PROTEIN LIGASE MIB2	Interproscan
PTHR11098 all species →	NICOTINATE PHOSPHORIBOSYLTRANSFERASE	Interproscan
PTHR22878 all species →	UNCHARACTERIZED	Interproscan
PTHR30298 all species →	H REPEAT-ASSOCIATED PREDICTED TRANSPOSASE	Interproscan
PTHR23346 all species →	TRANSLATIONAL ACTIVATOR GCN1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009887 all species →	Biological Process	animal organ morphogenesis	Interproscan
GO:0009888 all species →	Biological Process	tissue development	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0008641 all species →	Molecular Function	ubiquitin-like modifier activating enzyme activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0007219 all species →	Biological Process	Notch signaling pathway	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0004516 all species →	Molecular Function	nicotinate phosphoribosyltransferase activity	Interproscan
GO:0009435 all species →	Biological Process	NAD biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0034355 all species →	Biological Process	NAD salvage	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0004803 all species →	Molecular Function	transposase activity	Interproscan
GO:0006313 all species →	Biological Process	DNA transposition	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0030433 all species →	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan
GO:0043248 all species →	Biological Process	proteasome assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00763	pncB, NAPRT1; nicotinate phosphoribosyltransferase	EC:6.3.4.21	Nicotinate and nicotinamide metabolism	ko00760	deepkoala
K11886	ECM29; proteasome component ECM29	-	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.