Detailed information of g142.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047137814.1, E3 ubiquitin-protein ligase RBBP6 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P97868E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5
Q7Z6E9E3 ubiquitin-protein ligase RBBP6 OS=Homo sapiens OX=9606 GN=RBBP6 PE=1 SV=1
O94264Uncharacterized RING finger protein P8B7.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP8B7.15c PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|DWNN
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF08783DWNNDWNN domainDomainInterproscan
PF04564U-boxU-box domainDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF00305LipoxygenaseLipoxygenaseDomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13882Bravo_FIGEYBravo-like intracellular regionDomainInterproscan
PF00549Ligase_CoACoA-ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003613DomainU-box domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR014891DomainDWNN domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR003527Conserved_siteMitogen-activated protein (MAP) kinase, conserved siteInterproscan
IPR050117FamilyMitogen-activated protein kinaseInterproscan
IPR000907FamilyLipoxygenaseInterproscan
IPR036226Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan
IPR013819DomainLipoxygenase, C-terminalInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006578DomainMADF domainInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR026966DomainNeurofascin/L1/NrCAM, C-terminal domainInterproscan
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15439RETINOBLASTOMA-BINDING PROTEIN 6Interproscan
PTHR24055MITOGEN-ACTIVATED PROTEIN KINASEInterproscan
PTHR11771LIPOXYGENASEInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR21505UNCHARACTERIZEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004707Molecular FunctionMAP kinase activityInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0034440Biological Processlipid oxidationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19603MAPK15; mitogen-activated protein kinase 15EC:2.7.11.24
Ubiquitin systemko04121deepkoala
Protein kinasesko01001deepkoala

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