Detailed information of g14222.t3 in Acropora digitifera

Genomic Location: chr6Alt:29920929...29922404
NR annotation: XP_015763259.1, PREDICTED: gamma-aminobutyric acid receptor subunit alpha-5-like isoform X2 [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P34904Gamma-aminobutyric acid receptor subunit gamma-4 OS=Gallus gallus OX=9031 GN=GABRG4 PE=2 SV=1
P26714Gamma-aminobutyric acid receptor subunit beta OS=Lymnaea stagnalis OX=6523 PE=2 SV=1
Q08832Gamma-aminobutyric acid receptor subunit beta-like OS=Drosophila melanogaster OX=7227 GN=Lcch3 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02931
all species →		Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036734
all species →		Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006202
all species →		DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006201
all species →		FamilyNeurotransmitter-gated ion-channelInterproscan
IPR018000
all species →		Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18945
all species →		NEUROTRANSMITTER GATED ION CHANNELInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005230
all species →		Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220
all species →		Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005231
all species →		Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005254
all species →		Molecular Functionchloride channel activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0007268
all species →		Biological Processchemical synaptic transmissionInterproscan
GO:0030594
all species →		Molecular Functionneurotransmitter receptor activityInterproscan
GO:0042391
all species →		Biological Processregulation of membrane potentialInterproscan
GO:0043005
all species →		Cellular Componentneuron projectionInterproscan
GO:0045202
all species →		Cellular ComponentsynapseInterproscan
GO:0050877
all species →		Biological Processnervous system processInterproscan
GO:1902476
all species →		Biological Processchloride transmembrane transportInterproscan
GO:1904315
all species →		Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g14222.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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