Detailed information of g1423.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RLJ22814.1, hypothetical protein DJ031_00215, partial [bacterium endosymbiont of Escarpia laminata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P46100Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=ATRX PE=1 SV=6
Q7YQM4Transcriptional regulator ATRX OS=Pan troglodytes OX=9598 GN=ATRX PE=2 SV=1
Q7YQM3Transcriptional regulator ATRX OS=Pongo pygmaeus OX=9600 GN=ATRX PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF17981ADD_ATRXCysteine Rich ADD domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF10347Fmp27_GFWDKFmp27/BLTP2/Hobbit, GFWDK motif-containg RBG unitRepeatInterproscan
PF21675BLTP2_RBG-6BLTP2, sixth RBG moduleRepeatInterproscan
PF17846XRN_MXrn1 helical domainDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF02938GADGAD domainDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051476FamilyBacterial Response Regulator Aspartate PhosphataseInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR041430DomainATRX, ADD domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR025766DomainADD domainInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR044574FamilyATPase ARIP4-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019441DomainFMP27/BLTP2/Hobbit, GFWDK motif-containing RBG unitInterproscan
IPR048872DomainBLTP2, sixth RBG moduleInterproscan
IPR045167FamilyHobbitInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR027073Family5'-3' exoribonucleaseInterproscan
IPR041412DomainXrn1, helical domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR052224FamilyTHAP domain-containing proteinInterproscan
IPR047089DomainAspartate-tRNA ligase, type 1, anticodon recognition domainInterproscan
IPR004524FamilyAspartate-tRNA ligase, type 1Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR029351DomainGAD domainInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004115Homologous_superfamilyGAD-like domain superfamilyInterproscan
IPR002312FamilyAspartyl/Asparaginyl-tRNA synthetase, class IIbInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46630TETRATRICOPEPTIDE REPEAT PROTEIN 29Interproscan
PTHR45797RAD54-LIKEInterproscan
PTHR15678ANTIGEN MLAA-22-RELATEDInterproscan
PTHR47266ENDONUCLEASE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR123415'->3' EXORIBONUCLEASEInterproscan
PTHR46927AGAP005574-PAInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003341Biological Processcilium movementInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004815Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0006422Biological Processaspartyl-tRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24937TTC29; tetratricopeptide repeat protein 29-Chromosome and associated proteinsko03036deepkoala
Cilium and associated proteinsko03037deepkoala

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