Gene detail

Detailed information of g14235.t1 in Montipora capitata

Genomic Location: Sc0000517:47237...58663
NR annotation: XP_015754587.1, PREDICTED: uncharacterized protein LOC107334180 [Acropora digitifera]
Species abbreviation MCAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g14235.t1

atggcagaccaaatcaaagatcaagttcagaactgtgaagcttgcaatgacttcttagctagacaagaaaaggaaccattgatgacccacaagatccctgaaaccccttggtcaaaggttggtcaagatctcttcactctcggcgatgagaactatttagtgactgtcgattactacagtgattattttgagcttgatttcctatcagacactactgcagaatcaatgatagatgcaaccaaacgccactttgcacgtcacggcattgctgacatggtcaccgataatggtccacagtattcaagtgcacactccagcaagttcgctcgtgaatgggaatttcagcacactaccaattcaccattacatagccaaagcaatgggaaagctgagtcggcagtcaaaatcgcaaagaatctggtaaagaaggcaaaacgaggaacattttccgttcgtggaaagcttaagaagaaagcacattatcgtctgcgagtggaggcacgtattagtgacgacattttcgcttctacttccgtaattatcagagtcgaggtggcgaataaaatattgagtgctgatcctgatcaaagtctcaggtttccgagtccaatttactccgtaatcattccatttaacacgcccgtgggtcagaccattctacatctgagagtggaaaaaagcaaaaggcggagcaatagtgttgtgcgatacaggataaattcttttgatccttaccaaaagaaagctcttttcagtcttgatccatggaaaggctcactcaaaatctgcagggaactgccacagctagatagcccatatgacaaacctgtcaactttgtattgcaagtcgttgccaggactcaagaaaatgagcggaataccttaacggccgcaacacgagtttctatcgtggtggtaccagagtacgctggtaatgattatgtgcagtcatcgttagctgtggttaagaacacgtcagaggctgtagacagctctcggaggctgcggtttaataagagtgcaacttcgcgagagagaactgagttttctttgcatcgtatgtttcgtcgactatcccctgaagctaaaagagtgtccaaggcagacttacgcttctgtgaaatcatacgagagttaaagcgagaagtggcagatcatctgctagatgaccgctcacgcaagggggcagtttccgtgagactgggcccaagctcaattgcttcggctggaaaattgtctgagatcgtgaaagaagcaaactgcagcttccccgaggccaactgttccgatacagaatatcactcaaaataccgaacatttgatggaacctgcaacaatcttgaaaatcccttatggggagcggccgcgacaccattcacccgaatgttggatccagtctactatgattcaaatggtctctcagatcctgttgggttccctgatcagccatttgcacctcatcttccttcgccgcaccttgtcagcaaagtgtttttcattcatctcaaagaaggcaatagaaataacaaacgctattctcacatgcttatgcagtgggggcaattcctagatcatgatatatcatttacagcagaaagtgaagggagtgaaaagtgtttcttgccaaactgtgacgggtcagcagttgactttgagcctccttgctatcccataatgtacccagacgggtcttcatgtaccatgtttactcggtcagctgctgcttgccaaactgataatgaaaacataacaccaagggaacagcttaacacaatcacggcatttatagatggatctcagatatatggctcgagcagcgaggttgctcagcgactcagagatctgaactcaggaagaggcctcctgaagatatctcggccaagataccttcttccatttgtggaaacacctttcgatcctcctctgaacttgtgtcagcgattcggtggttgtttcgacgctggtgattttagagtcaacgaacagattgccctagtgtccatgcacaccttatggatccgagaacataaccgaatagcggagagtttgagcctattgaataaacactgggacacggaaaaagtctatcatgaaaccagaaaaatagtgggagcggtgcttcagcatatcacttataaccattacttgcctaaaattctgggcaataacgccttgcccacctaccgaggatacgaaaatatacaccctggtatcttaaacgtatttgcgacttctgcgtttagattcggtcatagtatggtaagaccaaagtttgctatgcttgacgccaattacgatcctgttgccccagatgtgcttctcagaaatgcttttttcaacaacaaacttgtacagagagagggcattgaacctgtgcttcttggacttctagccaacgaatcgcttgctgtgaatcgggaaatggcggcaggattgacaaagcatctttttcagcagccagaatcagatcatggctttgatcttgctgcgctgaatattcaacgcggtcgtgaccatggccttccgggttacggcgcatggaggcgcgaatgcaacttatctcacgcagatatttttcaagaaacaaattttgaaattataaatgctacatcccgacagatacttcacgaactttatgaagatgttgagtacgctgatctgtgggtttcaggcctagcagaggaccctattcctggagcaatagttggtcccaccttgcattgcatactgaaagaacaatttcgtcgtctgcgtgatggcgaccgtttctggtttgagagaaacggagtattttcagatgaacaagttaaagaggttcgaaaaacttcgctgtctcgtgtactgtgtgataacatatttggcatagtttctgttcaacgagatgcttttattgcagccaccgatgaacttaaacgagttgaatgtaccgacattcgtcaaatggacttgagcaaatggaaagaaaatcagccctcaccccatcaaacgtttggcagctggtcagattgggtttacacagtaagaaaatccacaggttcatgggcagttgcaaaagctggtgatctgtgccctggttcagtagtggatattgaatgccagcttgctgacggttcaccagctaaattggccggtcaagtgattcattgcaaagagaggattggtgtgtactgcaggaacagcgaacagcttgggaacgacccagtgtgcgctgattaccgtttccgatttctgtgtgccgacatcgaaaagcccctgttgacactctttccaagctttgctttaactgctggcaccgaagcatacgatttcacattgttgtcctcgtctgaataa

Transcript

g14235.t1

ATGGCAGACCAAATCAAAGATCAAGTTCAGAACTGTGAAGCTTGCAATGACTTCTTAGCTAGACAAGAAAAGGAACCATTGATGACCCACAAGATCCCTGAAACCCCTTGgtcaaaggttggtcaagatcTCTTCACTCTCGGCGATGAGAACTATTTAGTGACTGTCGATTACTACAGTGATTATTTTGAGCTTGATTTCCTATCAGACACTACTGCAGAATCAATGATAGATGCAACCAAACGCCACTTTGCACGTCACGGCATTGCTGACATGGTCACCGATAATGGTCCACAGTATTCAAGTGCACACTCCAGCAAGTTCGCTCGTGAATGGGAATTTCAGCACACTACCAATTCACCATTACATAGCCAAAGCAATGGGAAAGCTGAGTCGGCAGTCAAAATCGCAAAGAATCTGGTAAAGAAGGCAAAACGAGGAACATTTTCCGTTCGTGGAAAGCTTAAGAAGAAAGCACATTATCGTCTGCGAGTGGAGGCACGTATTAGTGACGACATTTTCGCTTCTACTTCCGTAATTATCAGAGTCGAGGTGGCGAATAAAATATTGAGTGCTGATCCTGATCAAAGTCTCAGGTTTCCGAGTCCAATTTACTCCGTAATCATTCCATTTAACACGCCCGTGGGTCAGACCATTCTACATCTGAGAGTGGAAAAAAGCAAAAGGCGGAGCAATAGTGTTGTGCGATACAGGATAAATTCTTTTGATCCTTACCAAAAGAAAGCTCTTTTCAGTCTTGATCCATGGAAAGGCTCACTCAAAATCTGCAGGGAACTGCCACAGCTAGATAGCCCATATGACAAACCTGTCAACTTTGTATTGCAAGTCGTTGCCAGGACTCAAGAAAATGAGCGGAATACCTTAACGGCCGCAACACGAGTTTCTATCGTGGTGGTACCAGAGTACGCTGGTAATGATTATGTGCAGTCATCGTTAGCTGTGGTTAAGAACACGTCAGAGGCTGTAGACAGCTCTCGGAGGCTGCGGTTTAATAAGAGTGCAACTTCGCGAGAGAGAACTGAGTTTTCTTTGCATCGTATGTTTCGTCGACTATCCCCTGAAGCTAAAAGAGTGTCCAAGGCAGACTTACGCTTCTGTGAAATCATACGAGAGTTAAAGCGAGAAGTGGCAGATCATCTGCTAGATGACCGCTCACGCAAGGGGGCAGTTTCCGTGAGACTGGGCCCAAGCTCAATTGCTTCGGCTGGAAAATTGTCTGAGATCGTGAAAGAAGCAAACTGCAGCTTCCCCGAGGCCAACTGTTCCGATACAGAATATCACTCAAAATACCGAACATTTGATGGAACCTGCAACAATCTTGAAAATCCCTTATGGGGAGCGGCCGCGACACCATTCACCCGAATGTTGGATCCAGTCTACTATGATTCAAATGGTCTCTCAGATCCTGTTGGGTTCCCTGATCAGCCATTTGCACCTCATCTTCCTTCGCCGCACCTTGTCAGCAAAGTGTTTTTCATTCATCTCAAAGAAGGCaatagaaataacaaacgcTATTCTCACATGCTTATGCAGTGGGGGCAATTCCTAGATCATGATATATCATTTACAGCAGAAAGTGAAGGGAGTGAAAAGTGTTTCTTGCCAAAcTGTGACGGGTCAGCAGTTGACTTTGAGCCTCCTTGCTATCCCATAATGTACCCAGACGGGTCTTCATGTACCATGTTTACTCGGTCAGCTGCTGCTTGCCAAACTGATAATGAAAACATAACACCAAGGGAACAGCTTAACACAATCACGGCATTTATAGATGGATCTCAGATATATGGCTCGAGCAGCGAGGTTGCTCAGCGACTCAGAGATCTGAACTCAGGAAGAGGCCTCCTGAAGATATCTCGGCCAAGATACCTTCTTCCATTTGTGGAAACACCTTTCGATCCTCCTCTGAACTTGTGTCAGCGATTCGGTGGTTGTTTCGACGCTGGTGATTTTAGAGTCAACGAACAGATTGCCCTAGTGTCCATGCACACCTTATGGATCCGAGAACATAACCGAATAGCGGAGAGTTTGAGCCTATTGAATAAACACTGGGACACGGAAAAAGTCTATCATGAAACCAGAAAAATAGTGGGAGCGGTGCTTCAGCATATCACTTATAACCATTACTTGCCTAAAATTCTGGGCAATAACGCCTTGCCCACCTACCGAGGATACGAAAATATACACCCTGGTATCTTAAACGTATTTGCGACTTCTGCGTTTAGATTCGGTCATAGTATGGTAAGACCAAAGTTTGCTATGCTTGACGCCAATTACGATCCTGTTGCCCCAGATGTGCTTCTCAGAAATGCTTTTTTCAACAACAAACTTGTACAGAGAGAGGGCATTGAACCTGTGCTTCTTGGACTTCTAGCCAACGAATCGCTTGCTGTGAATCGGGAAATGGCGGCAGGATTGACAAAGCATCTTTTTCAGCAGCCAGAATCAGATCATGGCTTTGATCTTGCTGCGCTGAATATTCAACGCGGTCGTGACCATGGCCTTCCGGGTTACGGCGCATGGAGGCGCGAATGCAACTTATCTCACGCAGATATTTTTCAagaaacaaattttgaaattataaATGCTACATCCCGACAGATACTTCACGAACTTTATGAAGATGTTGAGTACGCTGATCTGTGGGTTTCAGGCCTAGCAGAGGACCCTATTCCTGGAGCAATAGTTGGTCCCACCTTGCATTGCATACTGAAAGAACAATTTCGTCGTCTGCGTGATGGCGACCGTTTCTGGTTTGAGAGAAACGGAGTATTTTCAGATGAACAAGTTAAAGAGGTTCGAAAAACTTCGCTGTCTCGTGTACTGTGTGATAACATATTTGGCATAGTTTCTGTTCAACGAGATGCTTTTATTGCAGCCACCGATGAACTTAAACGAGTTGAATGTACCGACATTCGTCAAATGGACTTGAGCAAATGGAAAGAAAATCAGCCCTCACCCCATCAAACGTTTGGCAGCTGGTCAGATTGGGTTTACACAGTAAGAAAATCCACAGGTTCATGGGCAGTTGCAAAAGCTGGTGATCTGTGCCCTGGTTCAGTAGTGGATATTGAATGCCAGCTTGCTGACGGTTCACCAGCTAAATTGGCCGGTCAAGTGATTCATTGCAAAGAGAGGATTGGTGTGTACTGCAGGAACAGCGAACAGCTTGGGAACGACCCAGTGTGCGCTGATTACCGTTTCCGATTTCTGTGTGCCGACATCGAAAAGCCCCTGTTGACACTCTTTCCAAGCTTTGCTTTAACTGCTGGCACCGAAGCATACGATTTCACATTGTTGTCCTCGTCTGAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UQ28	Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2
Q92626	Peroxidasin homolog OS=Homo sapiens OX=9606 GN=PXDN PE=1 SV=2
A4IGL7	Peroxidasin OS=Xenopus tropicalis OX=8364 GN=pxdn PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000302 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13330 all species →	Mucin2_WxxW	Mucin-2 protein WxxW repeating region	Family	Interproscan
PF03098 all species →	An_peroxidase	Animal haem peroxidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR019791 all species →	Family	Haem peroxidase, animal-type	Interproscan
IPR025155 all species →	Domain	WxxW domain	Interproscan
IPR037120 all species →	Homologous_superfamily	Haem peroxidase domain superfamily, animal type	Interproscan
IPR050702 all species →	Family	Peroxidase Activity and Reactive Species Generation	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR010255 all species →	Homologous_superfamily	Haem peroxidase superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR015919 all species →	Homologous_superfamily	Cadherin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11475 all species →	OXIDASE/PEROXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0004601 all species →	Molecular Function	peroxidase activity	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g14235.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.