Gene detail

Detailed information of g1424.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_002165793.3, uncharacterized protein LOC100215655 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ULJ6	Zinc finger MIZ domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ZMIZ1 PE=1 SV=3
Q6P1E1	Zinc finger MIZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Zmiz1 PE=1 SV=1
Q8NF64	Zinc finger MIZ domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZMIZ2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000012 (this species only)
Orthogroup (gene family)	OG0000323 (this species only)
Orthogroup (gene family)	OG0000620 (this species only)
Orthogroup (gene family)	OG0001604 (this species only)
Orthogroup (gene family)	OG0003904 (this species only)
Orthogroup (gene family)	OG0003990 (this species only)
Orthogroup (gene family)	OG0007657 (this species only)
Orthogroup (gene family)	OG0009204 (this species only)
Orthogroup (gene family)	OG0009478 (this species only)
Orthogroup (gene family)	OG0014726 (this species only)
Orthogroup (gene family)	OG0172593 (this species only)
Orthogroup (gene family)	OG0172988 (this species only)
Orthogroup (gene family)	OG0173580 (this species only)
Orthogroup (gene family)	OG0174016 (this species only)
Transcription factor family	zf-MIZ · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02891 all species →	zf-MIZ	MIZ/SP-RING zinc finger	Domain	Interproscan
PF18028 all species →	Zmiz1_N	Zmiz1 N-terminal tetratricopeptide repeat domain	Repeat	Interproscan
PF08559 all species →	Cut8	Cut8, nuclear proteasome tether protein	Family	Interproscan
PF11107 all species →	FANCF	Fanconi anemia group F protein (FANCF)	Repeat	Interproscan
PF02887 all species →	PK_C	Pyruvate kinase, alpha/beta domain	Domain	Interproscan
PF18701 all species →	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan
PF03256 all species →	ANAPC10	Anaphase-promoting complex, subunit 10 (APC10)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004181 all species →	Domain	Zinc finger, MIZ-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR040797 all species →	Domain	Zmiz1, N-terminal tetratricopeptide repeat domain	Interproscan
IPR038422 all species →	Homologous_superfamily	Cut8/Sts1 superfamily	Interproscan
IPR013868 all species →	Family	Tethering factor for nuclear proteasome Cut8/Sts1	Interproscan
IPR035428 all species →	Family	Fanconi anemia group F protein	Interproscan
IPR036918 all species →	Homologous_superfamily	Pyruvate kinase, C-terminal domain superfamily	Interproscan
IPR015795 all species →	Domain	Pyruvate kinase, C-terminal	Interproscan
IPR001697 all species →	Family	Pyruvate kinase	Interproscan
IPR040676 all species →	Domain	Domain of unknown function DUF5641	Interproscan
IPR016901 all species →	Family	Anaphase-promoting complex subunit APC10/Doc1	Interproscan
IPR004939 all species →	Domain	APC10/DOC domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10782 all species →	ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR28032 all species →	FI02826P	Interproscan
PTHR14449 all species →	FANCONI ANEMIA GROUP F PROTEIN FANCF	Interproscan
PTHR11817 all species →	PYRUVATE KINASE	Interproscan
PTHR22955 all species →	RETROTRANSPOSON	Interproscan
PTHR12936 all species →	ANAPHASE-PROMOTING COMPLEX 10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016925 all species →	Biological Process	protein sumoylation	Interproscan
GO:0030374 all species →	Molecular Function	nuclear receptor coactivator activity	Interproscan
GO:0061665 all species →	Molecular Function	SUMO ligase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031144 all species →	Biological Process	proteasome localization	Interproscan
GO:0031965 all species →	Cellular Component	nuclear membrane	Interproscan
GO:0070628 all species →	Molecular Function	proteasome binding	Interproscan
GO:0071630 all species →	Biological Process	nuclear protein quality control by the ubiquitin-proteasome system	Interproscan
GO:0006974 all species →	Biological Process	DNA damage response	Interproscan
GO:0036297 all species →	Biological Process	interstrand cross-link repair	Interproscan
GO:0043240 all species →	Cellular Component	Fanconi anaemia nuclear complex	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004743 all species →	Molecular Function	pyruvate kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006096 all species →	Biological Process	glycolytic process	Interproscan
GO:0030955 all species →	Molecular Function	potassium ion binding	Interproscan
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0070979 all species →	Biological Process	protein K11-linked ubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03357	APC10, ANAPC10, DOC1; anaphase-promoting complex subunit 10	-	Chromosome and associated proteins	ko03036	deepkoala
K22403	ZMIZ; zinc finger MIZ domain-containing protein	-	Transcription	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.