Gene detail

Detailed information of g14253.t1 in Acropora digitifera

Genomic Location: chr6Alt:30317467...30325118
NR annotation: XP_029185892.2, monocarboxylate transporter 12-like isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

chr6Alt.g14253.t1

TTGGGTTTTGGAAATTTCTTGAACCTGTCTTATAACCCTTCTGCTCAAGCAGAAACTCTCGATCTGTTTCCCTGCAGGTTAGAAGAAGAAATTATCGTTACAACGTGCGTATTTGTTGCTAACACGACTTTGATCTGTGAAATGACAGATTTAAGAGGAGCGAGGTCGCATTCTTCAATGAACATAGAAAATCTTACTTCGATACCTGTTGGAGGGAGTAATATTTTGATGAACTACGCTCACAGACAACCTGCAACAACTTTTAGCCCCGAGAAAGATCGTGGTTGGGCCTGGGTTGTATGTGGTGGATCATTTTTCGTGATGTTTATGGTTTACGGTATTCACACATCATTTGGCGTTCTTCTAGTGGTTTTACTCAACCATTTCGACGCAAGTAAAGCAAGCACCGCTTGGATTGGTTCAATTTCCGTCAATCTTCTATTCCTCTTCAGCCCCGTCACCAGTTCTCTCGCTGGTCGATATGGCGTACGTGTGGTTACCATTGCGGGGGGACTGGTTATGAGCGTTGGGCTTTTCCTCAGTTCCTACGCGCCAAGCCTGCCTTTCCTTTACATCAGTTATGGTCTTCTTTTGGGAATTGGCACTAGTCTCTGTGCAACCATGGCATTGATTGTTTCTGCGGACTATTTTGACAGACACCTTTCTTTAGCCACTGGAATCGTTGCATCTGGGAGTAGCTTTGGAACCCTGGCTTTAGCTCCAACATTGCAAACTTTGGTGGAAAAATTTGGATGGCAAACAACATTTCGATTAATGGGGCTTGGAGGCTTATTGATTACCGTATCTGGGTTTCTTTATAAAACAGTGAAGAGGGACACGGCTGAAATACCTCCGCTAATGAATCAGTGTTTTGACACATCTGTTTTCAAGAACAAGGCGTTTGTATTGTGGACTTTAGCAACAACTATAGCTGGATTTGGTTATTTTATACCTCATTTCTTCCTGGTTCGATATTCCGAAGACTTGGGTTTCTCGTTACCCAAGAGCAGCTGGCTCATCTCTTTCCTCGGAATTTCTTCGGCAATTGGTCGACTGTTGTTCGGGCATATTTCTGACGTCTGTACTTTCAAAAATATTAATATCTACAAGACATGCATGTTCCTGTCTGGACTAGCTTCCATTTTGTGTCCTCTGGCAAGCTCGTATTGGGCATTGGTGTTGTATGTTGTGGTAATAGGGATATTGGATGGCTCCTACATTGGACTAATGTCGATAGTAACACTGGACATTGTTGGTGTACACAAAATTTCGTCCGCTTGGGGAATATTGTTCTTCTGTCAATCTTTCACTTATTTACTGGGTCCGCCAGCTGCAGGTTTTATGTACGATTCCCTGAAAACTTTCAAACCGGTCTTTTATTTGGCTGCTGGTCCAATGATTTTGGGTGCATTCTTGTTGGTCAGCGGAGTTCTCTGCAAACAGAACCAGTCCTCTCTTGGCCGGGAAGACATGACTGAGCTCGTTCCAATCCCTTCCTCGAAACCTTTCCTCGGAGGAGCTAATTGTTCCAATCACCAGCAGCCAGGTTTTACGTCCTCAGTGATCGTGCTAACAGAGCTCAAGGATATAGAATCTTTGATTGTCGTGGAGCGACTTACGGTGCTGTGAAAGTTACAAAGATAAGAGGTTAAAAGTAAGGTTGACTCGACAATGGCATGCTGATGAGGCTCAGGAGGGTCGATGCAGTTGTCCATGTCCATGCCTTCTACAATGCCCTGGTGATGTGGTTGTGCGCTTGCGTAGTTTATGGCCATACAATGGTGCTGGTGTATTATATGTCTACCTTGTCTAGTCTTTTTCTTGGCGCTTGATCGCCGAGATAACTACAGACAGGAGCTGTCCAGAATGGAAGAGGGTGGTTAAAGGTATTTTCGTGACTCGTGATCGGCCCTTTTTTTTCCCCGTGAAATGTGAAATGGGTTATTTTTTCCTCGTGAATCGTGATTTCCATACTAGCCGTGAAGCGTGATTTTGCAAAATTATTATCCGTGAAACGAGAAATAAATGTTTAATTCGCCG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1L1W9	Monocarboxylate transporter 10 OS=Danio rerio OX=7955 GN=slc16a10 PE=2 SV=1
Q8TF71	Monocarboxylate transporter 10 OS=Homo sapiens OX=9606 GN=SLC16A10 PE=1 SV=1
Q6GM59	Monocarboxylate transporter 12 OS=Xenopus laevis OX=8355 GN=slc16a12 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020846 all species →	Domain	Major facilitator superfamily domain	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050327 all species →	Family	Proton-linked Monocarboxylate Transporter	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360 all species →	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0008028 all species →	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08187	SLC16A10; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 10	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.