Detailed information of g1430.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_038065704.1, piggyBac transposable element-derived protein 4-like [Patiria miniata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P23508Colorectal mutant cancer protein OS=Homo sapiens OX=9606 GN=MCC PE=1 SV=2
Q5F477Lipid droplet-associated hydrolase OS=Gallus gallus OX=9031 GN=LDAH PE=2 SV=2
Q9H6V9Lipid droplet-associated hydrolase OS=Homo sapiens OX=9606 GN=LDAH PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02990EMP70Endomembrane protein 70FamilyInterproscan
PF03946Ribosomal_L11_NRibosomal protein L11, N-terminal domainDomainInterproscan
PF00298Ribosomal_L11Ribosomal protein L11, RNA binding domainDomainInterproscan
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF10506USHBP1_PDZ-bdHarmonin-binding protein USHBP1, PDZ-binding domainDomainInterproscan
PF13537GATase_7Glutamine amidotransferase domainDomainInterproscan
PF21788TNP-like_GBDTNP-like, GTP-binding insertion domainDomainInterproscan
PF10230LIDHydrolaseLipid-droplet associated hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040108FamilyLaa1/Sip1/HEATR5Interproscan
IPR004240FamilyNonaspanin (TM9SF)Interproscan
IPR005878FamilyLarge ribosomal subunit protein uL1, bacterial-typeInterproscan
IPR000911FamilyRibosomal protein uL11Interproscan
IPR036769Homologous_superfamilyLarge ribosomal subunit protein uL11, C-terminal domain superfamilyInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR036796Homologous_superfamilyLarge ribosomal subunit protein uL11, N-terminal domain superfamilyInterproscan
IPR020784DomainLarge ribosomal subunit protein uL11, N-terminalInterproscan
IPR020783DomainLarge ribosomal subunit protein uL11, C-terminalInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR016095Homologous_superfamilyLarge ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainInterproscan
IPR006519FamilyLarge ribosomal subunit protein uL11, bacterial-typeInterproscan
IPR023673Conserved_siteLarge ribosomal subunit protein uL1, conserved siteInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR040171FamilyHarmonin-binding protein USHBP1-likeInterproscan
IPR019536DomainHarmonin-binding protein USHBP1, PDZ-binding domainInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR017932DomainGlutamine amidotransferase type 2 domainInterproscan
IPR048366DomainTransposable element P transposase-like, GTP-binding insertion domainInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR019363FamilyLipid droplet-associated hydrolaseInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21663HYPOTHETICAL HEAT DOMAIN-CONTAININGInterproscan
PTHR10766TRANSMEMBRANE 9 SUPERFAMILY PROTEINInterproscan
PTHR3642754S RIBOSOMAL PROTEIN L1, MITOCHONDRIALInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23347COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATEDInterproscan
PTHR11907AMIDOPHOSPHORIBOSYLTRANSFERASEInterproscan
PTHR13390LIPASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0072657Biological Processprotein localization to membraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004044Molecular Functionamidophosphoribosyltransferase activityInterproscan
GO:0006164Biological Processpurine nucleotide biosynthetic processInterproscan
GO:0005811Cellular Componentlipid dropletInterproscan
GO:0016298Molecular Functionlipase activityInterproscan
GO:0019915Biological Processlipid storageInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02863RP-L1, MRPL1, rplA; large subunit ribosomal protein L1-Wnt signaling pathwayko04310deepkoala
Ribosomeko03011deepkoala

TOP