Detailed information of g1434.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_044171551.1, proteasome activator complex subunit 4-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q14997Proteasome activator complex subunit 4 OS=Homo sapiens OX=9606 GN=PSME4 PE=1 SV=2
F1MKX4Proteasome activator complex subunit 4 OS=Bos taurus OX=9913 GN=PSME4 PE=1 SV=1
F1QFR9Proteasome activator complex subunit 4A OS=Danio rerio OX=7955 GN=psme4a PE=3 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|DCUN1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03476MOSC_NMOSC N-terminal beta barrel domainDomainInterproscan
PF11919DUF3437Domain of unknown function (DUF3437)FamilyInterproscan
PF16507BLM10_midProteasome-substrate-size regulator, mid regionFamilyInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF00177Ribosomal_S7Ribosomal protein S7p/S5eDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF14555UBA_4UBA-like domainDomainInterproscan
PF03556Cullin_bindingCullin bindingFamilyInterproscan
PF02383Syja_NSacI homology domainFamilyInterproscan
PF01390SEASEA domainFamilyInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005303DomainMolybdenum cofactor sulfurase, middle domainInterproscan
IPR035309FamilyProteasome activator complex subunit 4Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR021843DomainProteasome activator complex subunit 4 C-terminal domainInterproscan
IPR032430DomainProteasome activator Blm10, mid regionInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR005717FamilySmall ribosomal subunit protein uS7, bacterial/organellar-typeInterproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR020606Conserved_siteSmall ribosomal subunit protein uS7, conserved siteInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR023798DomainSmall ribosomal subunit protein uS7 domainInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR036823Homologous_superfamilySmall ribosomal subunit protein uS7 domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR038980FamilySerine/threonine-protein kinase ATM, plantInterproscan
IPR042460Homologous_superfamilyDCN1-like, PONY binding domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR005176DomainPotentiating neddylation domainInterproscan
IPR014764FamilyDefective-in-cullin neddylation proteinInterproscan
IPR002013DomainSAC domainInterproscan
IPR043573FamilyPolyphosphoinositide phosphatase Fig4-likeInterproscan
IPR000082DomainSEA domainInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR029865FamilyDyslexia-associated protein KIAA0319-likeInterproscan
IPR037213Homologous_superfamilyRUN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32170PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4Interproscan
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37079SERINE/THREONINE-PROTEIN KINASE ATMInterproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR12281RP42 RELATEDInterproscan
PTHR45738POLYPHOSPHOINOSITIDE PHOSPHATASEInterproscan
PTHR46182FI19480P1Interproscan
PTHR46753FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0010499Biological Processproteasomal ubiquitin-independent protein catabolic processInterproscan
GO:0016504Molecular Functionpeptidase activator activityInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032182Molecular Functionubiquitin-like protein bindingInterproscan
GO:0045116Biological Processprotein neddylationInterproscan
GO:0097602Molecular Functioncullin family protein bindingInterproscan
GO:0016791Molecular Functionphosphatase activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0043813Molecular Functionphosphatidylinositol-3,5-bisphosphate 5-phosphatase activityInterproscan
GO:0046856Biological Processphosphatidylinositol dephosphorylationInterproscan
GO:0001764Biological Processneuron migrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0072383Biological Processplus-end-directed vesicle transport along microtubuleInterproscan
GO:1901098Biological Processpositive regulation of autophagosome maturationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02358tuf, TUFM; elongation factor Tu-Proteasomeko03051deepkoala
Pathways of neurodegeneration - multiple diseasesko05022deepkoala
Ubiquitin systemko04121deepkoala
Exosomeko04147deepkoala

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