Detailed information of g1437.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: RMX46759.1, hypothetical protein pdam_00007702 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P17138Homeobox protein HTR-A2 (Fragment) OS=Helobdella triserialis OX=6413 PE=3 SV=1
P21523Homeobox protein LOX2 (Fragment) OS=Hirudo medicinalis OX=6421 GN=LOX2 PE=2 SV=1
P14837Pancreas/duodenum homeobox protein 1 OS=Xenopus laevis OX=8355 GN=pdx1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00814TsaDtRNA N6-adenosine threonylcarbamoyltransferaseFamilyInterproscan
PF01912eIF-6eIF-6 familyFamilyInterproscan
PF10158LOH1CR12Tumour suppressor proteinFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000905DomainGcp-like domainInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR002769FamilyTranslation initiation factor IF6Interproscan
IPR018780FamilyBLOC-1-related complex subunit 5Interproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050569FamilyTrace Amine-Associated ReceptorInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050296FamilyAntennapedia-type homeoboxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11735TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASEInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR10784EUKARYOTIC TRANSLATION INITIATION FACTOR 6Interproscan
PTHR31634BLOC-1-RELATED COMPLEX SUBUNIT 5Interproscan
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan
PTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR45659HOMEOBOX PROTEIN HOXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0042256Biological Processcytosolic ribosome assemblyInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0000054Biological Processribosomal subunit export from nucleusInterproscan
GO:0000460Biological Processmaturation of 5.8S rRNAInterproscan
GO:0000470Biological Processmaturation of LSU-rRNAInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:1902626Biological Processassembly of large subunit precursor of preribosomeInterproscan
GO:0032418Biological Processlysosome localizationInterproscan
GO:0030672Cellular Componentsynaptic vesicle membraneInterproscan
GO:0031224Cellular Componentobsolete intrinsic component of membraneInterproscan
GO:0072384Biological Processorganelle transport along microtubuleInterproscan
GO:0098574Cellular Componentcytoplasmic side of lysosomal membraneInterproscan
GO:0099078Cellular ComponentBORC complexInterproscan
GO:1903744Biological Processpositive regulation of anterograde synaptic vesicle transportInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03264EIF6; translation initiation factor 6-Membrane traffickingko04131deepkoala
G protein-coupled receptorsko04030deepkoala
Translation factorsko03012deepkoala

TOP