Detailed information of g1438.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047143267.1, selenocysteine insertion sequence-binding protein 2-like isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3U1C4Selenocysteine insertion sequence-binding protein 2 OS=Mus musculus OX=10090 GN=Secisbp2 PE=2 SV=1
Q9QX72Selenocysteine insertion sequence-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Secisbp2 PE=1 SV=1
Q96T21Selenocysteine insertion sequence-binding protein 2 OS=Homo sapiens OX=9606 GN=SECISBP2 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyETS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01248Ribosomal_L7AeRibosomal protein L7Ae/L30e/S12e/Gadd45 familyDomainInterproscan
PF04389Peptidase_M28Peptidase family M28FamilyInterproscan
PF06733DEAD_2DEAD_2FamilyInterproscan
PF00178EtsEts-domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR004038DomainRibosomal protein eL8/eL30/eS12/Gadd45Interproscan
IPR040051FamilySelenocysteine insertion sequence-binding protein 2Interproscan
IPR029064Homologous_superfamilyRibosomal protein eL30-like superfamilyInterproscan
IPR007484DomainPeptidase M28Interproscan
IPR040234FamilyGlutaminyl-peptide cyclotransferase-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010614DomainRAD3-like helicase, DEADInterproscan
IPR014013DomainHelicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typeInterproscan
IPR006554DomainHelicase-like, DEXD box c2 typeInterproscan
IPR045028FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000418DomainEts domainInterproscan
IPR046328FamilyETS familyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR042416FamilyOligosaccharyltransferase complex subunit OSTCInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13284GH01354PInterproscan
PTHR12283GLUTAMINYL-PEPTIDE CYCLOTRANSFERASEInterproscan
PTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan
PTHR11849ETSInterproscan
PTHR13160OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTCInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR45698TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0035368Molecular Functionselenocysteine insertion sequence bindingInterproscan
GO:0043021Molecular Functionribonucleoprotein complex bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016603Molecular Functionglutaminyl-peptide cyclotransferase activityInterproscan
GO:0017186Biological Processpeptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferaseInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010569Biological Processregulation of double-strand break repair via homologous recombinationInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0045910Biological Processnegative regulation of DNA recombinationInterproscan
GO:0070182Molecular FunctionDNA polymerase bindingInterproscan
GO:0090657Biological Processtelomeric loop disassemblyInterproscan
GO:1904430Biological Processnegative regulation of t-circle formationInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008250Cellular Componentoligosaccharyltransferase complexInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10104FCN; ficolin-Translation factorsko03012deepkoala
Lectinsko04091deepkoala

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