Gene detail

Detailed information of g144.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047130922.1, epithelial splicing regulatory protein 1 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZVR8	Epithelial splicing regulatory protein 2 OS=Danio rerio OX=7955 GN=esrp2 PE=2 SV=2
A1L1G1	Epithelial splicing regulatory protein 1 OS=Danio rerio OX=7955 GN=esrp1 PE=2 SV=1
B2RYJ8	Epithelial splicing regulatory protein 2 OS=Rattus norvegicus OX=10116 GN=Esrp2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000015 (this species only)
Orthogroup (gene family)	OG0000038 (this species only)
Orthogroup (gene family)	OG0000220 (this species only)
Orthogroup (gene family)	OG0000540 (this species only)
Orthogroup (gene family)	OG0000672 (this species only)
Orthogroup (gene family)	OG0000951 (this species only)
Orthogroup (gene family)	OG0001494 (this species only)
Orthogroup (gene family)	OG0003147 (this species only)
Orthogroup (gene family)	OG0003831 (this species only)
Orthogroup (gene family)	OG0005225 (this species only)
Orthogroup (gene family)	OG0032252 (this species only)
Orthogroup (gene family)	OG0032551 (this species only)
Orthogroup (gene family)	OG0170801 (this species only)
Orthogroup (gene family)	OG0171579 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01547 all species →	SBP_bac_1	Bacterial extracellular solute-binding protein	Family	Interproscan
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF07727 all species →	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF17144 all species →	Ribosomal_L5e	Ribosomal large subunit proteins 60S L5, and 50S L18	Family	Interproscan
PF17921 all species →	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF17917 all species →	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00665 all species →	rve	Integrase core domain	Domain	Interproscan
PF00728 all species →	Glyco_hydro_20	Glycosyl hydrolase family 20, catalytic domain	Domain	Interproscan
PF01421 all species →	Reprolysin	Reprolysin (M12B) family zinc metalloprotease	Domain	Interproscan
PF01553 all species →	Acyltransferase	Acyltransferase	Family	Interproscan
PF16076 all species →	Acyltransf_C	Acyltransferase C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014597 all species →	Family	ABC transporter, periplasmic substrate-binding protein, predicted	Interproscan
IPR050490 all species →	Family	Bacterial solute-binding protein 1	Interproscan
IPR006059 all species →	Family	Bacterial-type extracellular solute-binding protein	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR039421 all species →	Family	Type 1 protein exporter	Interproscan
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR013103 all species →	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR005485 all species →	Family	Large ribosomal subunit protein uL18 eukaryotic/archaeal	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR041588 all species →	Domain	Integrase zinc-binding domain	Interproscan
IPR001584 all species →	Domain	Integrase, catalytic core	Interproscan
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR041373 all species →	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR038901 all species →	Family	Hexosaminidase D-like	Interproscan
IPR015883 all species →	Domain	Glycoside hydrolase family 20, catalytic domain	Interproscan
IPR001590 all species →	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR050666 all species →	Family	Epithelial Splicing Regulatory	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR002123 all species →	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR032098 all species →	Domain	Acyltransferase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43649 all species →	ARABINOSE-BINDING PROTEIN-RELATED	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43394 all species →	ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL	Interproscan
PTHR42648 all species →	TRANSPOSASE, PUTATIVE-RELATED	Interproscan
PTHR23410 all species →	RIBOSOMAL PROTEIN L5-RELATED	Interproscan
PTHR45749 all species →	-	Interproscan
PTHR37984 all species →	PROTEIN CBG26694	Interproscan
PTHR21040 all species →	UNCHARACTERIZED	Interproscan
PTHR46704 all species →	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR11905 all species →	ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN	Interproscan
PTHR13976 all species →	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	Interproscan
PTHR10983 all species →	1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0015421 all species →	Molecular Function	ABC-type oligopeptide transporter activity	Interproscan
GO:0090374 all species →	Biological Process	oligopeptide export from mitochondrion	Interproscan
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0008097 all species →	Molecular Function	5S rRNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0015929 all species →	Molecular Function	hexosaminidase activity	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0006509 all species →	Biological Process	membrane protein ectodomain proteolysis	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan
GO:0036149 all species →	Biological Process	phosphatidylinositol acyl-chain remodeling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02902	RP-L28, MRPL28, rpmB; large subunit ribosomal protein L28	-	Ribosome	ko03011	deepkoala
K05656	ABCB9, TAPL; ATP-binding cassette, subfamily B (MDR/TAP), member 9	-	Transporters	ko02000	deepkoala
K14459	HEX; hexosaminidase	EC:3.2.1.52	Other glycan degradation	ko00511	deepkoala
K14947	ESRP1_2; epithelial splicing regulatory protein 1/2	-	Spliceosome	ko03041	deepkoala
K17321	glpV; glycerol transport system substrate-binding protein	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.