Detailed information of g1443.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_020608350.1, MYCBP-associated protein-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
F1QJX5E3 ubiquitin-protein ligase ubr3 OS=Danio rerio OX=7955 GN=ubr3 PE=2 SV=2
Q5U430E3 ubiquitin-protein ligase UBR3 OS=Mus musculus OX=10090 GN=Ubr3 PE=1 SV=3
Q6ZT12E3 ubiquitin-protein ligase UBR3 OS=Homo sapiens OX=9606 GN=UBR3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14646MYCBPAPMYCBP-associated protein familyFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08953DUF1899Domain of unknown function (DUF1899)RepeatInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14555UBA_4UBA-like domainDomainInterproscan
PF18995PRT6_CProteolysis_6 C-terminalDomainInterproscan
PF16006NUSAPNucleolar and spindle-associated proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052822FamilyMYCBP-associatedInterproscan
IPR032707FamilyMYCBP-associated proteinInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015048DomainDomain of unknown function DUF1899Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015505FamilyCoroninInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR039164FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan
IPR044046DomainE3 ubiquitin-protein ligase UBR-like, C-terminalInterproscan
IPR026756FamilyNucleolar and spindle-associated protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48333MYCBP-ASSOCIATED PROTEINInterproscan
PTHR35558SGNH_HYDRO DOMAIN-CONTAINING PROTEINInterproscan
PTHR10856CORONINInterproscan
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR15874NUCLEOLAR AND SPINDLE-ASSOCIATED PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061025Biological Processmembrane fusionInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0071596Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000281Biological Processmitotic cytokinesisInterproscan
GO:0005819Cellular ComponentspindleInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0040001Biological Processestablishment of mitotic spindle localizationInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0007076Biological Processmitotic chromosome condensationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12166HACE1; E3 ubiquitin-protein ligase HACE1EC:2.3.2.26
Ubiquitin systemko04121deepkoala

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