Detailed information of g1444.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3113928.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UJT0Tubulin epsilon chain OS=Homo sapiens OX=9606 GN=TUBE1 PE=1 SV=1
Q9D6T1Tubulin epsilon chain OS=Mus musculus OX=10090 GN=Tube1 PE=1 SV=1
P05219Tubulin beta chain OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nda3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00153Mito_carrMitochondrial carrier proteinRepeatInterproscan
PF06842DUF1242Protein of unknown function (DUF1242)FamilyInterproscan
PF02136NTF2Nuclear transport factor 2 (NTF2) domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF14374Ribos_L4_asso_C60S ribosomal protein L4 C-terminal domainDomainInterproscan
PF00573Ribosomal_L4Ribosomal protein L4/L1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052217FamilyMitochondrial and Peroxisomal Carrier ProteinInterproscan
IPR018108RepeatMitochondrial substrate/solute carrierInterproscan
IPR023395Homologous_superfamilyMitochondrial carrier domain superfamilyInterproscan
IPR002067FamilyMitochondrial carrier proteinInterproscan
IPR051523FamilyKISH domain-containing proteinInterproscan
IPR009653FamilyProtein kishInterproscan
IPR045875FamilyNuclear transport factor 2Interproscan
IPR032710Homologous_superfamilyNTF2-like domain superfamilyInterproscan
IPR018222DomainNuclear transport factor 2, eukaryoteInterproscan
IPR002075DomainNuclear transport factor 2 domainInterproscan
IPR000217FamilyTubulinInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR004057FamilyEpsilon tubulinInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR025755DomainLarge ribosomal subunit protein uL4, C-terminal domainInterproscan
IPR045240FamilyLarge ribosomal subunit protein uL4, eukaryotic and archaeal typeInterproscan
IPR002136FamilyLarge ribosomal subunit protein uL4Interproscan
IPR023574Homologous_superfamilyLarge ribosomal subunit protein uL4 domain superfamilyInterproscan
IPR013000Conserved_siteLarge ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR45939PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATEDInterproscan
PTHR13229PROTEIN KISH-AInterproscan
PTHR12612NUCLEAR TRANSPORT FACTOR 2Interproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR11588TUBULINInterproscan
PTHR1943160S RIBOSOMAL PROTEIN L4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005347Molecular FunctionATP transmembrane transporter activityInterproscan
GO:0005779Cellular Componentobsolete integral component of peroxisomal membraneInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0015217Molecular FunctionADP transmembrane transporter activityInterproscan
GO:0015228Molecular Functioncoenzyme A transmembrane transporter activityInterproscan
GO:0015230Molecular FunctionFAD transmembrane transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0044610Molecular FunctionFMN transmembrane transporter activityInterproscan
GO:0051724Molecular FunctionNAD transmembrane transporter activityInterproscan
GO:0080122Molecular FunctionAMP transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0009306Biological Processprotein secretionInterproscan
GO:0046907Biological Processintracellular transportInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0016973Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0044613Cellular Componentnuclear pore central transport channelInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02930RP-L4e, RPL4; large subunit ribosomal protein L4e-Transportersko02000deepkoala
Ribosomeko03011deepkoala

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