Detailed information of g14465.t1 in Acropora digitifera

Genomic Location: chr6Alt:32941344...32945145
NR annotation: XP_029201624.2, L-threonine dehydratase catabolic TdcB-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9WYJ1L-threonine ammonia-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0356 PE=1 SV=1
P0AGF8L-threonine dehydratase catabolic TdcB OS=Escherichia coli O157:H7 OX=83334 GN=tdcB PE=3 SV=1
P0AGF7L-threonine dehydratase catabolic TdcB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=tdcB PE=3 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291
all species →		PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036052
all species →		Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR050147
all species →		FamilySerine/Threonine DehydrataseInterproscan
IPR027278
all species →		Family1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydraseInterproscan
IPR001926
all species →		DomainTryptophan synthase beta chain-like, PALP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48078
all species →		THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003941
all species →		Molecular FunctionL-serine ammonia-lyase activityInterproscan
GO:0004794
all species →		Molecular Functionthreonine deaminase activityInterproscan
GO:0006565
all species →		Biological ProcessL-serine catabolic processInterproscan
GO:0006567
all species →		Biological Processthreonine catabolic processInterproscan
GO:0009097
all species →		Biological Processisoleucine biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g14465.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP