Detailed information of g14538.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: CAH3117248.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3ZYB7TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Rattus norvegicus OX=10116 GN=Taf1b PE=3 SV=1
P97358TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Mus musculus OX=10090 GN=Taf1b PE=1 SV=2
F1R3W0TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Danio rerio OX=7955 GN=taf1b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20644Rrn7_cyclin_NRrn7/TAF1B, N-terminal cyclin domainDomainInterproscan
PF20645Rrn7_cyclin_CRrn7/TAF1B, C-terminal cyclin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033599FamilyRNA polymerase I transcription initiation factor TAF1B/Rrn7Interproscan
IPR048540DomainRrn7/TAF1B, N-terminal cyclin domainInterproscan
IPR048538DomainRrn7/TAF1B, C-terminal cyclin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31576TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001188Biological ProcessRNA polymerase I preinitiation complex assemblyInterproscan
GO:0005668Cellular ComponentRNA polymerase transcription factor SL1 complexInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0042790Biological Processnucleolar large rRNA transcription by RNA polymerase IInterproscan
GO:0070860Cellular ComponentRNA polymerase I core factor complexInterproscan

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