Detailed information of g1458.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047123840.1, cold shock domain-containing protein E1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P18395Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1
Q91W50Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1
O75534Cold shock domain-containing protein E1 OS=Homo sapiens OX=9606 GN=CSDE1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03645Tctex-1Tctex-1 familyFamilyInterproscan
PF00856SETSET domainFamilyInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF02807ATP-gua_PtransNATP:guanido phosphotransferase, N-terminal domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052603FamilyEF-hand calcium-binding domain-containing protein 6Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR033304FamilyDeleted in lung and esophageal cancer protein 1Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR005334FamilyDynein light chain Tctex-1 likeInterproscan
IPR038586Homologous_superfamilyTctex-1-like superfamilyInterproscan
IPR050600FamilySETD3/SETD6 methyltransferaseInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR044429DomainSETD4, SET domainInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR024642DomainSUZ-C domainInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR011129DomainCold shock domainInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR022413DomainATP:guanido phosphotransferase, N-terminalInterproscan
IPR036802Homologous_superfamilyATP:guanido phosphotransferase, N-terminal domain superfamilyInterproscan
IPR022414DomainATP:guanido phosphotransferase, catalytic domainInterproscan
IPR000749FamilyATP:guanido phosphotransferaseInterproscan
IPR014746Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDInterproscan
PTHR46348DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1Interproscan
PTHR21255T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAINInterproscan
PTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEInterproscan
PTHR12913UNR PROTEIN N-RAS UPSTREAM GENE PROTEINInterproscan
PTHR11547ARGININE OR CREATINE KINASEInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0008285Biological Processnegative regulation of cell population proliferationInterproscan
GO:0015631Molecular Functiontubulin bindingInterproscan
GO:0005868Cellular Componentcytoplasmic dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0016279Molecular Functionprotein-lysine N-methyltransferase activityInterproscan
GO:0018026Biological Processpeptidyl-lysine monomethylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0018023Biological Processpeptidyl-lysine trimethylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016772Molecular Functiontransferase activity, transferring phosphorus-containing groupsInterproscan
GO:0004111Molecular Functioncreatine kinase activityInterproscan
GO:0046314Biological Processphosphocreatine biosynthetic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10420DYNLT1_3; dynein light chain Tctex-type 1/3-Cytoskeleton proteinsko04812deepkoala

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