Gene detail

Detailed information of g1460.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_020917440.1, visual pigment-like receptor peropsin [Exaiptasia diaphana]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q923Y7	Trace amine-associated receptor 4 OS=Rattus norvegicus OX=10116 GN=Taar4 PE=3 SV=1
O60293	Zinc finger C3H1 domain-containing protein OS=Homo sapiens OX=9606 GN=ZFC3H1 PE=1 SV=3
Q4R8R3	Coiled-coil domain-containing protein 112 OS=Macaca fascicularis OX=9541 GN=CCDC112 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000247 (this species only)
Orthogroup (gene family)	OG0000684 (this species only)
Orthogroup (gene family)	OG0001748 (this species only)
Orthogroup (gene family)	OG0002389 (this species only)
Orthogroup (gene family)	OG0003807 (this species only)
Orthogroup (gene family)	OG0003882 (this species only)
Orthogroup (gene family)	OG0004956 (this species only)
Orthogroup (gene family)	OG0006672 (this species only)
Orthogroup (gene family)	OG0008169 (this species only)
Orthogroup (gene family)	OG0013211 (this species only)
Orthogroup (gene family)	OG0019888 (this species only)
Orthogroup (gene family)	OG0171234 (this species only)
Orthogroup (gene family)	OG0172373 (this species only)
Orthogroup (gene family)	OG0172956 (this species only)
Transcription factor family	THAP · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02493 all species →	MORN	MORN repeat	Repeat	Interproscan
PF10650 all species →	zf-C3H1	Putative zinc-finger domain	Domain	Interproscan
PF05485 all species →	THAP	THAP domain	Domain	Interproscan
PF00090 all species →	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF01400 all species →	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003409 all species →	Repeat	MORN repeat	Interproscan
IPR052849 all species →	Family	MORN repeat-containing protein	Interproscan
IPR039902 all species →	Family	Coiled-coil domain-containing protein CCDC148/CCDC112	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019607 all species →	Domain	Putative zinc-finger domain	Interproscan
IPR039278 all species →	Family	NURS complex subunit red1	Interproscan
IPR003107 all species →	Repeat	HAT (Half-A-TPR) repeat	Interproscan
IPR006612 all species →	Domain	THAP-type zinc finger	Interproscan
IPR038441 all species →	Homologous_superfamily	THAP-type zinc finger superfamily	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR024079 all species →	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR006026 all species →	Domain	Peptidase, metallopeptidase	Interproscan
IPR001506 all species →	Domain	Peptidase M12A	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR050125 all species →	Family	G-protein coupled receptor opsins	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR004888 all species →	Family	Glycoside hydrolase family 63	Interproscan
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR039795 all species →	Family	E3 ubiquitin-protein ligase listerin	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46917 all species →	MORN REPEAT-CONTAINING PROTEIN 2	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21549 all species →	MUTATED IN BLADDER CANCER 1	Interproscan
PTHR21563 all species →	UNCHARACTERIZED	Interproscan
PTHR47696 all species →	THAP DOMAIN-CONTAINING PROTEIN 2	Interproscan
PTHR10127 all species →	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan
PTHR24240 all species →	OPSIN	Interproscan
PTHR10412 all species →	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	Interproscan
PTHR12389 all species →	ZINC FINGER PROTEIN 294	Interproscan
PTHR22878 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000178 all species →	Cellular Component	exosome (RNase complex)	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007602 all species →	Biological Process	phototransduction	Interproscan
GO:0008020 all species →	Molecular Function	G protein-coupled photoreceptor activity	Interproscan
GO:0071482 all species →	Biological Process	cellular response to light stimulus	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0004573 all species →	Molecular Function	Glc3Man9GlcNAc2 oligosaccharide glucosidase activity	Interproscan
GO:0006487 all species →	Biological Process	protein N-linked glycosylation	Interproscan
GO:0009311 all species →	Biological Process	oligosaccharide metabolic process	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0043023 all species →	Molecular Function	ribosomal large subunit binding	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0072344 all species →	Biological Process	rescue of stalled ribosome	Interproscan
GO:1990112 all species →	Cellular Component	RQC complex	Interproscan
GO:1990116 all species →	Biological Process	ribosome-associated ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g1460.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.