Gene detail

Detailed information of g147.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_035690647.1, carboxypeptidase D-like isoform X2 [Branchiostoma floridae]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P83852	Carboxypeptidase D (Fragment) OS=Lophonetta specularioides OX=75873 GN=CPD PE=1 SV=1
O89001	Carboxypeptidase D OS=Mus musculus OX=10090 GN=Cpd PE=1 SV=2
O75976	Carboxypeptidase D OS=Homo sapiens OX=9606 GN=CPD PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000011 (this species only)
Orthogroup (gene family)	OG0000030 (this species only)
Orthogroup (gene family)	OG0000267 (this species only)
Orthogroup (gene family)	OG0000771 (this species only)
Orthogroup (gene family)	OG0001417 (this species only)
Orthogroup (gene family)	OG0001480 (this species only)
Orthogroup (gene family)	OG0001712 (this species only)
Orthogroup (gene family)	OG0001775 (this species only)
Orthogroup (gene family)	OG0013735 (this species only)
Orthogroup (gene family)	OG0018201 (this species only)
Orthogroup (gene family)	OG0029697 (this species only)
Orthogroup (gene family)	OG0048312 (this species only)
Orthogroup (gene family)	OG0080300 (this species only)
Orthogroup (gene family)	OG0172054 (this species only)
Orthogroup (gene family)	OG0173505 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF13620 all species →	CarboxypepD_reg	Carboxypeptidase regulatory-like domain	Domain	Interproscan
PF00246 all species →	Peptidase_M14	Zinc carboxypeptidase	Domain	Interproscan
PF21376 all species →	TOR1A_C	Torsin-1A, C-terminal domain	Domain	Interproscan
PF06309 all species →	Torsin	Torsin	Family	Interproscan
PF05585 all species →	DUF1758	Putative peptidase (DUF1758)	Family	Interproscan
PF03564 all species →	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR008969 all species →	Homologous_superfamily	Carboxypeptidase-like, regulatory domain superfamily	Interproscan
IPR000834 all species →	Domain	Peptidase M14, carboxypeptidase A	Interproscan
IPR050753 all species →	Family	Peptidase M14 domain-containing protein	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR049337 all species →	Domain	Torsin-1A, C-terminal domain	Interproscan
IPR010448 all species →	Family	Torsin	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036423 all species →	Homologous_superfamily	Superoxide dismutase-like, copper/zinc binding domain superfamily	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR008737 all species →	Domain	Peptidase aspartic, putative	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR005312 all species →	Family	Protein of unknown function DUF1759	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR001969 all species →	Active_site	Aspartic peptidase, active site	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR049562 all species →	Family	Solute carrier family 25 member 33/36-like	Interproscan
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24246 all species →	OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR	Interproscan
PTHR11532 all species →	PROTEASE M14 CARBOXYPEPTIDASE	Interproscan
PTHR10760 all species →	TORSIN	Interproscan
PTHR47331 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47027 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45829 all species →	MITOCHONDRIAL CARRIER PROTEIN RIM2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004181 all species →	Molecular Function	metallocarboxypeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0006518 all species →	Biological Process	peptide metabolic process	Interproscan
GO:0016485 all species →	Biological Process	protein processing	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006801 all species →	Biological Process	superoxide metabolic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004190 all species →	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0000002 all species →	Biological Process	mitochondrial genome maintenance	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0015218 all species →	Molecular Function	pyrimidine nucleotide transmembrane transporter activity	Interproscan
GO:1990519 all species →	Biological Process	pyrimidine nucleotide import into mitochondrion	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15116	SLC25A33_36, RIM2; solute carrier family 25, member 33/36	-	Transporters	ko02000	deepkoala
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.