Gene detail

Detailed information of g1477.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3157329.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A7SK48	Eukaryotic translation initiation factor 3 subunit A OS=Nematostella vectensis OX=45351 GN=v1g190699 PE=3 SV=2
Q6PCR7	Eukaryotic translation initiation factor 3 subunit A OS=Danio rerio OX=7955 GN=eif3a PE=2 SV=1
P23116	Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07575	Nucleopor_Nup85	Nup85 Nucleoporin	Family	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01399	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011502	Family	Nucleoporin Nup85-like	Interproscan
IPR039938	Family	Transcription factor Sp4-like	Interproscan
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR027512	Family	Eukaryotic translation initiation factor 3 subunit A	Interproscan
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13373	FROUNT PROTEIN-RELATED	Interproscan
PTHR14947	ZINC FINGER PROTEIN	Interproscan
PTHR43172	ADENYLOSUCCINATE LYASE	Interproscan
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan
PTHR33244	INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR14005	EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006406	Biological Process	mRNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0031080	Cellular Component	nuclear pore outer ring	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004018	Molecular Function	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0044208	Biological Process	'de novo' AMP biosynthetic process	Interproscan
GO:0070626	Molecular Function	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005852	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0001732	Biological Process	formation of cytoplasmic translation initiation complex	Interproscan
GO:0002188	Biological Process	translation reinitiation	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0043614	Cellular Component	multi-eIF complex	Interproscan
GO:0071540	Cellular Component	eukaryotic translation initiation factor 3 complex, eIF3e	Interproscan
GO:0071541	Cellular Component	eukaryotic translation initiation factor 3 complex, eIF3m	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03254	EIF3A; translation initiation factor 3 subunit A	-	Translation factors	ko03012	deepkoala