Detailed information of g1479.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022783731.1, LOW QUALITY PROTEIN: laminin-like protein epi-1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P19137Laminin subunit alpha-1 OS=Mus musculus OX=10090 GN=Lama1 PE=1 SV=2
P25391Laminin subunit alpha-1 OS=Homo sapiens OX=9606 GN=LAMA1 PE=1 SV=2
Q16787Laminin subunit alpha-3 OS=Homo sapiens OX=9606 GN=LAMA3 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF05753TRAP_betaTranslocon-associated protein beta (TRAPB)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF08662eIF2AEukaryotic translation initiation factor eIF2ARepeatInterproscan
PF06732Pescadillo_NPescadillo N-terminusFamilyInterproscan
PF00110wntwnt familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR015797Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000409DomainBEACH domainInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR051944FamilyBEACH domain-containing proteinInterproscan
IPR011387FamilyTranslation initiation factor 2AInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR013979DomainTranslation initiation factor, beta propellor-like domainInterproscan
IPR010613FamilyPescadilloInterproscan
IPR005817FamilyWntInterproscan
IPR043158Homologous_superfamilyWnt, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR12861TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNITInterproscan
PTHR10574NETRIN/LAMININ-RELATEDInterproscan
PTHR46108BLUE CHEESEInterproscan
PTHR13227EUKARYOTIC TRANSLATION INITIATION FACTOR 2AInterproscan
PTHR12221PESCADILLO - RELATEDInterproscan
PTHR12027WNT RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0070545Cellular ComponentPeBoW complexInterproscan
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016055Biological ProcessWnt signaling pathwayInterproscan
GO:0005109Molecular Functionfrizzled bindingInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030182Biological Processneuron differentiationInterproscan
GO:0045165Biological Processcell fate commitmentInterproscan
GO:0060070Biological Processcanonical Wnt signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14843PES1, NOP7; pescadillo-Ribosome biogenesisko03009deepkoala

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