Gene detail

Detailed information of g14802.t2 in Paracondylactis sinensis

Genomic Location: Chr_5:7609068...7613853
NR annotation: no NCBI-NR hit recorded
Species Paracondylactis sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

g14802.t2

TTTGAGACAAGCAGCTGTCAGTCTTACGATTCGAAAAATGGCGGAAAGAAGTGTTTTGACGGTCGTTCAAAAACCATACAAAACCCAAGAATCCATGCGATCTAAGCTGGAAGAATGGCGTAGAACGAAACAGCAACAAACGGCTAAACAGCCGAAACAACAAACAATTCCTCGGACGCCTGTAGTCAATTCTAGATTTTCTCAGCATAAAGCTACAAGTACTAAATCTAACAGCAAGGGAGCTTCGCTATCTAAGCCATCATTGTCTCATCGCAAGAGAAAATCATTTCCTGCGTTGCAGTACGACAAGATCACAGACGAAAACACAGCTGAAGACAAGAGCAAACATTCCACAATTCAGAAAGAAAATTTGTCAGAAGATCCATTGTTTGGGAGCAAGCCACCAGAATGTTTTGAGATCGAAATTACACCTGATCGGAAGAAAGCAAGGAGAAGTACTTTTACCATTGAGACTCCAATGAAAGATGTTGCTATAGAAATTAAAGAAAATCTTGAAGCATGCAGAAATAATCAACAAAATCTTAGAAACAAACTAGAAGGATGGAGGGAAAGTAAAAGGAAATTACAAGCAGGACCAACCATCCAAAAAAGCTCGAAACCACAAATCAAATTGCAGCACTTTTGCAAGGCGAAGGATGGTTTAGGCAGAAAAAATAGGAAAAAAACTTTGGATCCAGGCAACTCTAGGCAAGTGTGTACTGCAAAGAAAAGAGAAGAAAACATAAGAGTCAAGCCTCCCAAGAGAAACACACCCTCTACACAAGTAGAAAAAGTGTCTCAGGTTACGAAAAGTAAAGTGAAACCAAAAGATGATAAAGTCAGCTTACCAATAACACCAGTGAAACTACCACATATGGATAAGTCACTATCAATGAGAGCAAGACTTGAATTGTGGAGAAAAGAAAAAGGAAAAGAACAAGGAATCCCAAAGACACCAGCAACCTTGCAAAGAAAGAGTACAATGACAGCGATGAAGAAGCACCACCAACCCATCACCATGGATACCAAAGAACCACTGCAGCTTGAACCTTTTGACACTATGACATGTGATATGGCCGAGAAGGAACCAACACCAGAAGAGATAACAAAAAGATTGCAAGATTGTTTGGATAAATTGGAAGAGGATAAAACTAATGATGATGTGATTGCAAATCAACTGGATGAAATACACAAGTGTCACCCAGGTGTATTACAATGTGCAGAGTATTGGATTTGCAGAGCTAAAATTGCAGAGCATGAAGAGGATGATGGCAGGGTTGTGTGCTTGTATGAGCAGGCATTAGTTTTCAATGCAGAGCCTGAGCACTTAATCAAGGAGGCTGTTGCAGGATACTCAAAAACAAGGAAAGGCCAAGAGGAGACTGAAAAGGAAGAAGTAATGCCTGCAAAGGTGCCTGCAGATGTGTCCACTGAAGAGCCTGCTGCTCTTTTTCCGGTAACACCCCACAGAGAAGTTGATGCCTTGAAACAAGCTGGTCAGCCATCACCCTTGTACTCCTCTATTATCAAGTACAGTGTTACAAAGGCAACACCTTTCAAAACCAGGTTGAATTCCTGTGAAAGGCCAGTTGTGACACCAGTCCGCAGGTCAGCAAGACTTGAAAGACGCAGCATGCACTATCCAATAATGTTACAGGAACATGGCCTGGCTGTAAGACACTTAGATGATCTGCCAGAAGACATCAAAAAAGATGTTTTGTTTAAACCCAATTTTACAGTACAGAATGATTTGAATGAAGCATGGAAGGATCTGTGGAATGAATGAGATAGCAGTATATTGACATTATGCACCATACTCCTGGTGGGGAACAGTTTGGCAAGGGGTGGTGATTCAATAGCAAACATGCTCCTTGGTCATGAGTCTGAACATACACTCTGTGTTATGATTGACGACTTTTTCTTGTGGGTGGACATGCCAGTCGTGCCATTTGATTGATTACTGCTTGCCGGAAAACCCCCAATAAATTAGTGCCATTGACAAGAAGTCTTTTATCAAACTCTATTGAGTATGAATGGCATGGTTGAAATCAGGGGGGAAAAGGATGCAAATAATGGTAATGATGCTGTAGATTTGTTCCAGAGTTGATCATTTAGGCTAGTTTCATACTTCAGATTTCTAATCGACCTAACGACATCAGAAAATAACACCCAGTTGAGCTATTTTTAAGCTTTGGTTCATGAAAAGTTTAAAGTTTTAAAGACTTTCAACATTTTAAAATCCATGTAAAGAATACTACAGTGTCTATGTCTGAGACATTTGGTGTAGCAACACGAGAGGTGTTGATGTGCTGGTAAACATTTTCTGTAAAGTGGGAACTGAAGGTTTATACTTCCAGTTTTAATTTAAAAGTTTGTGAACTCTGCATTAAATGTGATGAAACAATTATTAAAAACTAGACACTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15297 all species →	CKAP2_C	Cytoskeleton-associated protein 2 C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052855 all species →	Family	Cytoskeleton-associated protein 2-like	Interproscan
IPR029197 all species →	Domain	Cytoskeleton-associated protein 2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47078 all species →	CYTOSKELETON-ASSOCIATED PROTEIN 2-LIKE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0072686 all species →	Cellular Component	mitotic spindle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g14802.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.