Genomic Location: chr1Alt:24012129...24013711
NR annotation: XP_015772070.1, PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107350356 [Acropora digitifera]
Species Acropora digitifera · all data for this species · gene families
| CDS |
| g1485.t1 |
| Transcript |
| chr1Alt.g1485.t1 |
| Protein |
| chr1Alt.g1485.t1 |
| UniProt accession | Description |
|---|---|
| Q9FGH2 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1 |
| Q9LMK2 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1 |
| Q8GVZ6 | Protein G1 OS=Oryza sativa subsp. japonica OX=39947 GN=G1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04852 all species → | ALOG_dom | ALOG domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013762 all species → | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR006936 all species → | Domain | ALOG domain | Interproscan |
| IPR040222 all species → | Family | ALOG family | Interproscan |
| IPR011010 all species → | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31165 all species → | PROTEIN G1-LIKE2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0006310 all species → | Biological Process | DNA recombination | Interproscan |
| GO:0015074 all species → | Biological Process | DNA integration | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0009299 all species → | Biological Process | mRNA transcription | Interproscan |
g1485.t1.
