Detailed information of g149.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029180286.1, far upstream element-binding protein 2-like isoform X3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96AE4Far upstream element-binding protein 1 OS=Homo sapiens OX=9606 GN=FUBP1 PE=1 SV=3
Q32PX7Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1
Q91WJ8Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036850Homologous_superfamilyNucleoside diphosphate kinase-like domain superfamilyInterproscan
IPR026736FamilyProtein virilizerInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR006578DomainMADF domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR006569DomainCID domainInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23185UNCHARACTERIZEDInterproscan
PTHR19303TRANSPOSONInterproscan
PTHR24246OLFACTORY RECEPTOR AND ADENOSINE RECEPTORInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINInterproscan
PTHR21505UNCHARACTERIZEDInterproscan
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0036396Cellular ComponentRNA N6-methyladenosine methyltransferase complexInterproscan
GO:0080009Biological Processobsolete mRNA methylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan

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