Detailed information of g1490.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAH3044983.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HD33Large ribosomal subunit protein uL29m OS=Homo sapiens OX=9606 GN=MRPL47 PE=1 SV=2
Q8K2Y7Large ribosomal subunit protein uL29m OS=Mus musculus OX=10090 GN=Mrpl47 PE=1 SV=2
Q08DT6Large ribosomal subunit protein uL29m OS=Bos taurus OX=9913 GN=MRPL47 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF15019C9orf72-likeC9orf72-like protein familyFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01842ACTACT domainDomainInterproscan
PF00742Homoserine_dhHomoserine dehydrogenaseDomainInterproscan
PF03447NAD_binding_3Homoserine dehydrogenase, NAD binding domainDomainInterproscan
PF00237Ribosomal_L22Ribosomal protein L22p/L17eDomainInterproscan
PF06984MRP-L47Mitochondrial 39-S ribosomal protein L47 (MRP-L47)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR027819FamilyGuanine nucleotide exchange factor C9orf72Interproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR016204FamilyHomoserine dehydrogenaseInterproscan
IPR002912DomainACT domainInterproscan
IPR001342DomainHomoserine dehydrogenase, catalyticInterproscan
IPR045865Homologous_superfamilyACT-like domainInterproscan
IPR019811Conserved_siteHomoserine dehydrogenase, conserved siteInterproscan
IPR005106DomainAspartate/homoserine dehydrogenase, NAD-bindingInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036394Homologous_superfamilyRibosomal protein uL22 superfamilyInterproscan
IPR001063FamilyLarge ribosomal subunit protein uL22Interproscan
IPR018260Conserved_siteLarge ribosomal subunit protein uL22, conserved siteInterproscan
IPR005721FamilyLarge ribosomal subunit protein uL22, eukaryotic/archaealInterproscan
IPR038340Homologous_superfamilyMRP-L47 superfamily, mitochondrialInterproscan
IPR010729FamilyLarge ribosomal subunit protein uL29m, mitochondrialInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR31855GUANINE NUCLEOTIDE EXCHANGE C9ORF72Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43331HOMOSERINE DEHYDROGENASEInterproscan
PTHR1159360S RIBOSOMAL PROTEIN L17Interproscan
PTHR21183RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004412Molecular Functionhomoserine dehydrogenase activityInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0009088Biological Processthreonine biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0005761Cellular Componentmitochondrial ribosomeInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00003hom; homoserine dehydrogenaseEC:1.1.1.3
Ribosomeko03011deepkoala
Transfer RNA biogenesisko03016deepkoala
Glycosaminoglycan binding proteinsko00536deepkoala
Ribosomeko03011deepkoala
Lysine biosynthesisko00300deepkoala

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