Detailed information of g1491.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_029189264.1, cation channel sperm-associated protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q90876Interferon regulatory factor 1 OS=Gallus gallus OX=9031 GN=IRF1 PE=2 SV=1
Q3SZP0Interferon regulatory factor 1 OS=Bos taurus OX=9913 GN=IRF1 PE=2 SV=1
A0FIN4Interferon regulatory factor 1 OS=Sus scrofa OX=9823 GN=IRF1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyIRF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF05132RNA_pol_Rpc4RNA polymerase III RPC4FamilyInterproscan
PF17800NPLNucleoplasmin-like domainDomainInterproscan
PF16090DUF4819Domain of unknown function (DUF4819)FamilyInterproscan
PF00022ActinActinFamilyInterproscan
PF00167FGFFibroblast growth factorDomainInterproscan
PF15998DUF4773Domain of unknown function (DUF4773)FamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00605IRFInterferon regulatory factor transcription factorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821DomainIon transport domainInterproscan
IPR028746FamilyCation channel sperm-associated protein 1Interproscan
IPR007811FamilyDNA-directed RNA polymerase III subunit RPC4Interproscan
IPR041232DomainNucleoplasmin-like domainInterproscan
IPR052412FamilyCell Cycle and Developmental Transcription RegulatorsInterproscan
IPR032147DomainDomain of unknown function DUF4819Interproscan
IPR004000FamilyActin familyInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR002209FamilyFibroblast growth factor familyInterproscan
IPR008996Homologous_superfamilyCytokine IL1/FGFInterproscan
IPR031941DomainDomain of unknown function DUF4773Interproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR050093FamilyABC Transporter, Small Molecule ImporterInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001346DomainInterferon regulatory factor, DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47193CATION CHANNEL SPERM-ASSOCIATED PROTEIN 1Interproscan
PTHR13408DNA-DIRECTED RNA POLYMERASE IIIInterproscan
PTHR13059HMG-BOX TRANSCRIPTION FACTOR BBXInterproscan
PTHR11937ACTINInterproscan
PTHR11486FIBROBLAST GROWTH FACTORInterproscan
PTHR36299AGAP008005-PAInterproscan
PTHR42781SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTAInterproscan
PTHR11949INTERFERON REGULATORY FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005227Molecular Functioncalcium-activated cation channel activityInterproscan
GO:0005245Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0007283Biological ProcessspermatogenesisInterproscan
GO:0030317Biological Processflagellated sperm motilityInterproscan
GO:0036128Cellular ComponentCatSper complexInterproscan
GO:0060296Biological Processregulation of cilium beat frequency involved in ciliary motilityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan
GO:0042797Biological ProcesstRNA transcription by RNA polymerase IIIInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0002376Biological Processimmune system processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05779ynjD; putative thiamine transport system ATP-binding protein-Transcription factorsko03000deepkoala
Glycosaminoglycan binding proteinsko00536deepkoala
Chromosome and associated proteinsko03036deepkoala
Transportersko02000deepkoala

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