Gene detail

Detailed information of g1495.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: XP_047125280.1, uncharacterized protein MAL13P1.304 isoform X3 [Hydra vulgaris]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UQB3	Catenin delta-2 OS=Homo sapiens OX=9606 GN=CTNND2 PE=1 SV=3
O35927	Catenin delta-2 OS=Mus musculus OX=10090 GN=Ctnnd2 PE=1 SV=1
O00192	Splicing regulator ARVCF OS=Homo sapiens OX=9606 GN=ARVCF PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000000 (this species only)
Orthogroup (gene family)	OG0000096 (this species only)
Orthogroup (gene family)	OG0000411 (this species only)
Orthogroup (gene family)	OG0000488 (this species only)
Orthogroup (gene family)	OG0000604 (this species only)
Orthogroup (gene family)	OG0000951 (this species only)
Orthogroup (gene family)	OG0001724 (this species only)
Orthogroup (gene family)	OG0002240 (this species only)
Orthogroup (gene family)	OG0006434 (this species only)
Orthogroup (gene family)	OG0048299 (this species only)
Orthogroup (gene family)	OG0048358 (this species only)
Orthogroup (gene family)	OG0080391 (this species only)
Orthogroup (gene family)	OG0171574 (this species only)
Orthogroup (gene family)	OG0173802 (this species only)
Transcription factor family	HMG · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564 all species →	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan
PF13843 all species →	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF01839 all species →	FG-GAP	FG-GAP repeat	Repeat	Interproscan
PF08592 all species →	Anthrone_oxy	Anthrone oxygenase	Family	Interproscan
PF00514 all species →	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005312 all species →	Family	Protein of unknown function DUF1759	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR029526 all species →	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR029684 all species →	Family	Schlafen family	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR013519 all species →	Repeat	Integrin alpha beta-propellor	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR000413 all species →	Family	Integrin alpha chain	Interproscan
IPR013901 all species →	Family	Anthrone oxygenase	Interproscan
IPR000225 all species →	Repeat	Armadillo	Interproscan
IPR028435 all species →	Family	Plakophilin/Delta catenin	Interproscan
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050140 all species →	Family	SRY-related HMG-box transcription factors	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052055 all species →	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR47272 all species →	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR12155 all species →	SCHLAFEN	Interproscan
PTHR23220 all species →	INTEGRIN ALPHA	Interproscan
PTHR36535 all species →	YALI0E30327P	Interproscan
PTHR10372 all species →	PLAKOPHILLIN-RELATED	Interproscan
PTHR10270 all species →	SOX TRANSCRIPTION FACTOR	Interproscan
PTHR11697 all species →	GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN	Interproscan
PTHR33050 all species →	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005178 all species →	Molecular Function	integrin binding	Interproscan
GO:0007160 all species →	Biological Process	cell-matrix adhesion	Interproscan
GO:0007229 all species →	Biological Process	integrin-mediated signaling pathway	Interproscan
GO:0008305 all species →	Cellular Component	integrin complex	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0033627 all species →	Biological Process	cell adhesion mediated by integrin	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0007043 all species →	Biological Process	cell-cell junction assembly	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0009653 all species →	Biological Process	anatomical structure morphogenesis	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23491	CTNND2; catenin delta-2	-	Wnt signaling pathway	ko04310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.