Detailed information of g15.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_112828658.1, YebC/PmpR family DNA-binding transcriptional regulator [Rhizobium cremeum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B9JRY6Probable transcriptional regulatory protein Avi_3631 OS=Allorhizobium ampelinum (strain ATCC BAA-846 / DSM 112012 / S4) OX=311402 GN=Avi_3631 PE=3 SV=1
Q92M88Probable transcriptional regulatory protein R02753 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=R02753 PE=3 SV=1
Q8U9K1Probable transcriptional regulatory protein Atu3727 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3727 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyETS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01709Transcrip_regTACO1/YebC second and third domainFamilyInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02214BTB_2BTB/POZ domainDomainInterproscan
PF04790Sarcoglycan_1Sarcoglycan complex subunit proteinFamilyInterproscan
PF00178EtsEts-domainDomainInterproscan
PF00583Acetyltransf_1Acetyltransferase (GNAT) familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR026564Homologous_superfamilyTranscriptional regulator TACO1-like, domain 3Interproscan
IPR029072Homologous_superfamilyYebC-likeInterproscan
IPR002876FamilyTranscriptional regulator TACO1-likeInterproscan
IPR048300DomainTACO1/YebC-like, second and third domainsInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR005821DomainIon transport domainInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR003968FamilyPotassium channel, voltage dependent, KvInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR003974FamilyPotassium channel, voltage dependent, Kv3Interproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR006875FamilySarcoglycan complex subunit proteinInterproscan
IPR039972FamilySarcoglycan gamma/delta/zetaInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR046328FamilyETS familyInterproscan
IPR000418DomainEts domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR000182DomainGNAT domainInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR051016FamilyDiverse Substrate AcetyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12532UNCHARACTERIZEDInterproscan
PTHR24252ACROSIN-RELATEDInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR44927FK506-BINDING PROTEIN 15Interproscan
PTHR12939SARCOGLYCANInterproscan
PTHR11849ETSInterproscan
PTHR10545DIAMINE N-ACETYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0016012Cellular Componentsarcoglycan complexInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0016747Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0008080Molecular FunctionN-acetyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12563SGCD; delta-sarcoglycan-Exosomeko04147deepkoala
Exosomeko04147deepkoala
Ion channelsko04040deepkoala
Viral myocarditisko05416deepkoala

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