Detailed information of g1505.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAF1549098.1, unnamed protein product [Didymodactylos carnosus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q91WI7KICSTOR complex protein ITFG2 OS=Mus musculus OX=10090 GN=Itfg2 PE=2 SV=1
Q5RBH8KICSTOR complex protein ITFG2 OS=Pongo abelii OX=9601 GN=ITFG2 PE=2 SV=1
Q969R8KICSTOR complex protein ITFG2 OS=Homo sapiens OX=9606 GN=ITFG2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF13012MitMem_regMaintenance of mitochondrial structure and functionFamilyInterproscan
PF07970COPIIcoated_ERVEndoplasmic reticulum vesicle transporter FamilyInterproscan
PF15907Itfg2Integrin-alpha FG-GAP repeat-containing protein 2RepeatInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF08170POPLDPOPLD (NUC188) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040057FamilySpermatogenesis-defective protein 39Interproscan
IPR038132Homologous_superfamilyVps16, C-terminal domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR024969DomainEIF3F/CSN6-like, C-terminalInterproscan
IPR045888FamilyEndoplasmic reticulum vesicle transporterInterproscan
IPR012936DomainEndoplasmic reticulum vesicle transporter, C-terminalInterproscan
IPR031793FamilyIntegrin-alpha FG-GAP repeat-containing protein 2Interproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR039182FamilyRibonucleases P/MRP protein subunit Pop1Interproscan
IPR012590DomainPOPLD domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13364DEFECTIVE SPERMATOGENESIS PROTEIN 39Interproscan
PTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDInterproscan
PTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINInterproscan
PTHR16317INTEGRIN ALPHA REPEAT DOMAIN-CONTAININGInterproscan
PTHR22731RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0007034Biological Processvacuolar transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0031369Molecular Functiontranslation initiation factor bindingInterproscan
GO:0071541Cellular Componenteukaryotic translation initiation factor 3 complex, eIF3mInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan
GO:0030173Cellular Componentobsolete integral component of Golgi membraneInterproscan
GO:0030176Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0032006Biological Processregulation of TOR signalingInterproscan
GO:0140007Cellular ComponentKICSTOR complexInterproscan
GO:0000172Cellular Componentribonuclease MRP complexInterproscan
GO:0001682Biological ProcesstRNA 5'-leader removalInterproscan
GO:0005655Cellular Componentnucleolar ribonuclease P complexInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan

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