Gene detail

Detailed information of g1507.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAF3834386.1, unnamed protein product [Rotaria sp. Silwood1]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8K4K3	Tribbles homolog 2 OS=Mus musculus OX=10090 GN=Trib2 PE=2 SV=2
Q92519	Tribbles homolog 2 OS=Homo sapiens OX=9606 GN=TRIB2 PE=1 SV=1
Q28283	Tribbles homolog 2 OS=Canis lupus familiaris OX=9615 GN=TRIB2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08397	IMD	IRSp53/MIM homology domain	Family	Interproscan
PF00293	NUDIX	NUDIX domain	Domain	Interproscan
PF00856	SET	SET domain	Family	Interproscan
PF13087	AAA_12	AAA domain	Domain	Interproscan
PF13086	AAA_11	AAA domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013606	Domain	IMD/I-BAR domain	Interproscan
IPR030127	Family	I-BAR domain containing protein MTSS1/MTSS2	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR023211	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR000086	Domain	NUDIX hydrolase domain	Interproscan
IPR003565	Family	Bis(5'-nucleosyl)-tetraphosphatase	Interproscan
IPR051325	Family	Nudix hydrolase domain-containing protein	Interproscan
IPR015797	Homologous_superfamily	NUDIX hydrolase-like domain superfamily	Interproscan
IPR020084	Conserved_site	NUDIX hydrolase, conserved site	Interproscan
IPR001214	Domain	SET domain	Interproscan
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR002893	Domain	Zinc finger, MYND-type	Interproscan
IPR044421	Domain	SMYD4, SET domain	Interproscan
IPR052097	Family	SET and MYND domain-containing protein	Interproscan
IPR047187	Domain	Upf1-like, C-terminal helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041679	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR045055	Family	DNA2/NAM7-like helicase	Interproscan
IPR024104	Family	Pseudokinase tribbles family/serine-threonine-protein kinase 40	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15708	ACTIN BUNDLING/MISSING IN METASTASIS-RELATED	Interproscan
PTHR23313	TSEC1-RELATED	Interproscan
PTHR31511	PROTEIN CBG23764	Interproscan
PTHR21340	DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT	Interproscan
PTHR46165	SET AND MYND DOMAIN-CONTAINING PROTEIN 4	Interproscan
PTHR10887	DNA2/NAM7 HELICASE FAMILY	Interproscan
PTHR22961	SER/THR PROTEIN KINASE-TRB	Interproscan
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR46074	CYSTEINE-RICH PROTEIN CRIP FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007009	Biological Process	plasma membrane organization	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005543	Molecular Function	phospholipid binding	Interproscan
GO:0015629	Cellular Component	actin cytoskeleton	Interproscan
GO:0030031	Biological Process	cell projection assembly	Interproscan
GO:0031235	Cellular Component	obsolete intrinsic component of the cytoplasmic side of the plasma membrane	Interproscan
GO:0061024	Biological Process	membrane organization	Interproscan
GO:0008796	Molecular Function	bis(5'-nucleosyl)-tetraphosphatase activity	Interproscan
GO:0004081	Molecular Function	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	Interproscan
GO:0006167	Biological Process	AMP biosynthetic process	Interproscan
GO:0006754	Biological Process	ATP biosynthetic process	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0042826	Molecular Function	histone deacetylase binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0031048	Biological Process	regulatory ncRNA-mediated heterochromatin formation	Interproscan
GO:0031380	Cellular Component	nuclear RNA-directed RNA polymerase complex	Interproscan
GO:0031434	Molecular Function	mitogen-activated protein kinase kinase binding	Interproscan
GO:0032436	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0043405	Biological Process	regulation of MAP kinase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01518	NUDT2; bis(5'-nucleosidyl)-tetraphosphatase	EC:3.6.1.17	Protein kinases	ko01001	deepkoala
			Domain-containing proteins not elsewhere classified	ko04990	deepkoala
			Domain-containing proteins not elsewhere classified	ko04990	deepkoala
			RIG-I-like receptor signaling pathway	ko04622	deepkoala
			Pyrimidine metabolism	ko00240	deepkoala