Gene detail

Detailed information of g1507.t1 in Tripedalia maipoensis

Genomic Location: scaffold_10:5033401...5055923
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01414 all species →	DSL	Delta serrate ligand	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001774 all species →	Domain	Delta/Serrate/lag-2 (DSL) protein	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR051355 all species →	Family	Notch and Slit guidance protein	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836 all species →	SLIT HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007154 all species →	Biological Process	cell communication	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0048495 all species →	Molecular Function	Roundabout binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g1507.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.