Detailed information of g151.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047135178.1, EH domain-binding protein 1 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8NDI1EH domain-binding protein 1 OS=Homo sapiens OX=9606 GN=EHBP1 PE=1 SV=3
Q69ZW3EH domain-binding protein 1 OS=Mus musculus OX=10090 GN=Ehbp1 PE=1 SV=3
Q8N3D4EH domain-binding protein 1-like protein 1 OS=Homo sapiens OX=9606 GN=EHBP1L1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF13517FG-GAP_3FG-GAP-like repeatRepeatInterproscan
PF12130bMERB_domBivalent Mical/EHBP Rab binding domainDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF12851Tet_JBPOxygenase domain of the 2OGFeDO superfamily DomainInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR022735DomainbMERB domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR050540FamilyF-actin Monooxygenase MicalInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR040175FamilyMethylcytosine dioxygenase TET1/2/3Interproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR024779Domain2OGFeDO JBP1/TET, oxygenase domainInterproscan
IPR046942DomainMethylcytosine dioxygenase TET1-3, oxygenase domainInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR044633FamilyCleavage stimulation factor subunit 1-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050839FamilyRho-associated Serine/Threonine KinaseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR46580SENSOR KINASE-RELATEDInterproscan
PTHR23167CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATEDInterproscan
PTHR23358UNCHARACTERIZEDInterproscan
PTHR44133CLEAVAGE STIMULATION FACTOR SUBUNIT 1Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR22988MYOTONIC DYSTROPHY S/T KINASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031941Cellular Componentfilamentous actinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006211Biological Processobsolete 5-methylcytosine catabolic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070579Molecular Function5-methylcytosine dioxygenase activityInterproscan
GO:0080111Biological Processobsolete DNA demethylationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005848Cellular ComponentmRNA cleavage stimulating factor complexInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0018107Biological Processpeptidyl-threonine phosphorylationInterproscan
GO:0031032Biological Processactomyosin structure organizationInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04392RAC1; Ras-related C3 botulinum toxin substrate 1-Chromosome and associated proteinsko03036deepkoala
Spliceosomeko03041deepkoala
GTP-binding proteinsko04031deepkoala

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