Detailed information of g1510.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCP3666896.1, DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q887Q9Alginate biosynthesis protein AlgA OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=algA PE=3 SV=1
P0C7J3Xanthan biosynthesis protein XanB OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=xanB PE=3 SV=1
Q88ND5Alginate biosynthesis protein AlgA OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=algA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00111Fer22Fe-2S iron-sulfur cluster binding domainDomainInterproscan
PF17039Glyco_tran_10_NFucosyltransferase, N-terminalDomainInterproscan
PF00852Glyco_transf_10Glycosyltransferase family 10 (fucosyltransferase) C-termFamilyInterproscan
PF01050MannoseP_isomerMannose-6-phosphate isomeraseFamilyInterproscan
PF00483NTP_transferaseNucleotidyl transferaseFamilyInterproscan
PF01044VinculinVinculin familyFamilyInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF03188Cytochrom_B561Eukaryotic cytochrome b561FamilyInterproscan
PF03351DOMONDOMON domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001041Domain2Fe-2S ferredoxin-type iron-sulfur binding domainInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR001055FamilyAdrenodoxin-likeInterproscan
IPR036010Homologous_superfamily2Fe-2S ferredoxin-like superfamilyInterproscan
IPR018298Binding_siteAdrenodoxin, iron-sulphur binding siteInterproscan
IPR001503FamilyGlycosyl transferase family 10Interproscan
IPR038577Homologous_superfamilyGT10-like, C-terminal domain superfamilyInterproscan
IPR031481DomainFucosyltransferase, N-terminalInterproscan
IPR051161FamilyMannose-6-phosphate isomerase type 2Interproscan
IPR001538DomainMannose-6-phosphate isomerase, type II, C-terminalInterproscan
IPR005835DomainNucleotidyl transferase domainInterproscan
IPR049577DomainGDP-mannose pyrophosphorylase, N-terminal domainInterproscan
IPR011051Homologous_superfamilyRmlC-like cupin domain superfamilyInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR006375FamilyMannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR006077FamilyVinculin/alpha-cateninInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR001033FamilyAlpha-cateninInterproscan
IPR006593DomainCytochrome b561/ferric reductase transmembraneInterproscan
IPR005018DomainDOMON domainInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23426FERREDOXIN/ADRENODOXINInterproscan
PTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEInterproscan
PTHR46390MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASEInterproscan
PTHR18914ALPHA CATENINInterproscan
PTHR23130CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEINInterproscan
PTHR24064SOLUTE CARRIER FAMILY 22 MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan
GO:0140647Biological ProcessP450-containing electron transport chainInterproscan
GO:0006486Biological Processprotein glycosylationInterproscan
GO:0008417Molecular Functionfucosyltransferase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0036065Biological ProcessfucosylationInterproscan
GO:0046920Molecular Functionalpha-(1->3)-fucosyltransferase activityInterproscan
GO:0004475Molecular Functionmannose-1-phosphate guanylyltransferase (GTP) activityInterproscan
GO:0009298Biological ProcessGDP-mannose biosynthetic processInterproscan
GO:0005976Biological Processpolysaccharide metabolic processInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0000271Biological Processpolysaccharide biosynthetic processInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05691CTNNA; catenin alpha-Biofilm formation - Pseudomonas aeruginosako02025deepkoala
Cytoskeleton proteinsko04812deepkoala

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