Detailed information of g1513.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCT4673579.1, DegT/DnrJ/EryC1/StrS family aminotransferase [Prolixibacteraceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q58466Uncharacterized protein MJ1066 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1066 PE=3 SV=1
P39623Spore coat polysaccharide biosynthesis protein SpsC OS=Bacillus subtilis (strain 168) OX=224308 GN=spsC PE=3 SV=1
A4WAM5UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase OS=Enterobacter sp. (strain 638) OX=399742 GN=arnB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02410RsfSRibosomal silencing factor during starvation FamilyInterproscan
PF01655Ribosomal_L32eRibosomal protein L32FamilyInterproscan
PF01041DegT_DnrJ_EryC1DegT/DnrJ/EryC1/StrS aminotransferase familyDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF03357Snf7Snf7FamilyInterproscan
PF05175MTSMethyltransferase small domainDomainInterproscan
PF01266DAOFAD dependent oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR004394FamilyProtein Iojap/ribosomal silencing factor RsfSInterproscan
IPR001515FamilyLarge ribosomal subunit protein eL32Interproscan
IPR018263Conserved_siteLarge ribosomal subunit protein eL32, conserved siteInterproscan
IPR036351Homologous_superfamilyLarge ribosomal subunit protein eL32 superfamilyInterproscan
IPR000653FamilyDegT/DnrJ/EryC1/StrS aminotransferaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR005024FamilySnf7 familyInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR007848DomainMethyltransferase small domainInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR051720FamilyrRNA N6-Adenosine-Methyltransferase/Polyamine SynthaseInterproscan
IPR045170FamilyMTOX familyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR006076DomainFAD dependent oxidoreductaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21043IOJAP SUPERFAMILY ORTHOLOGInterproscan
PTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT NInterproscan
PTHR30244TRANSAMINASEInterproscan
PTHR18947HOOK PROTEINSInterproscan
PTHR24023COLLAGEN ALPHAInterproscan
PTHR22761CHARGED MULTIVESICULAR BODY PROTEINInterproscan
PTHR23290UNCHARACTERIZEDInterproscan
PTHR10961PEROXISOMAL SARCOSINE OXIDASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0090071Biological Processnegative regulation of ribosome biogenesisInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0000271Biological Processpolysaccharide biosynthetic processInterproscan
GO:0008483Molecular Functiontransaminase activityInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0030705Biological Processcytoskeleton-dependent intracellular transportInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0030020Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0007034Biological Processvacuolar transportInterproscan
GO:0000815Cellular ComponentESCRT III complexInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0006900Biological Processvesicle budding from membraneInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0008988Molecular FunctionrRNA (adenine-N6-)-methyltransferase activityInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0008115Molecular Functionsarcosine oxidase activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0033514Biological ProcessL-lysine catabolic process to acetyl-CoA via L-pipecolateInterproscan
GO:0050031Molecular FunctionL-pipecolate oxidase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12195CHMP6, VPS20; charged multivesicular body protein 6-Ribosome biogenesisko03009deepkoala
Ribosome biogenesisko03009deepkoala
Exosomeko04147deepkoala

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