Gene detail

Detailed information of g15136.t1.1 in Hydra viridissima

Genomic Location: :...
NR annotation: XP_047130310.1, TNF receptor-associated factor 5-like isoform X3 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6DJN2	TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1
B5DF45	TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1
P70196	TNF receptor-associated factor 6 OS=Mus musculus OX=10090 GN=Traf6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05517	p25-alpha	p25-alpha	Domain	Interproscan
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR008907	Family	Tubulin polymerization-promoting protein	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015631	Molecular Function	tubulin binding	Interproscan
GO:0046785	Biological Process	microtubule polymerization	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0033209	Biological Process	tumor necrosis factor-mediated signaling pathway	Interproscan
GO:0070534	Biological Process	protein K63-linked ubiquitination	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan