Gene detail

Detailed information of g15179.t1 in Montipora capitata

Genomic Location: Sc0000588:7567...37668
NR annotation: XP_029204333.2, mitogen-activated protein kinase kinase kinase 4-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g15179.t1

atggcggaggaagatgcgtcttcccagcttctaacaggctctccttgcgatgagatcgacccagcggaactgtttgaaagcggtttcgatataggagctgaaggagaccacgtgaatgacaggggttctggttcagaattcgactcggagtgtgaggatcaggtggatttgttttcatcggagaacgatttctccgatgactttccaagcctagaacttgagagttttccatacggagtcacaccgccaagagatatcagacgacaaaaggaaagactgcggaaggagaaagagaaggtatctaacgttataaaaggacaatttagtcgcgaactgcgttctaatccctctgaaaaagcggagttggatagacgaaaaaagcggggatcggctttgttgacaacggaacgagcattccggagaaggatgaaaagggccagtgttgatgcgatatcttttaatggaatcgcggatactgccaaatcgctggaaattcccagtattaaaattgaatcaactagtcggtttatgtcactggactgcgtttgtgaagactccaccgaatcttttgttattgaggatcacgcgaccaacacaggatctattcctgtaagacagacagtcgtgcgtggccatcccagggccactcgctcggaatctgaccctcgtagcttctcagctcggaattacgttaatccgagttgcccagaagacagaatggatttctatagaacgttttctctgctaattaagctaggttcactggcgcataaacagcaggagagccagaaacaacaaatccatagcagcagtgtggaaagtcagagctcggaagagaacaagaaatggaaggtcgaattgtcacaagcattgtggctggagctacaggcatggcatgcaaacagatctatgagtgagcaggatcaatatctcatggttgcacgtgccagtgtgaatgaggtattggatgaagtaataaacttcaaggttaagatagaagggaaaagttctcatgtaattgaggacggaaatgacatcaactgccaatcagaaacagtgacactggatggctcttctcaagaagaatcaacagagtttattgagttcacacataacactgaatgtgccacaaacctaacaaatggtgaacaattaacattgtcagatggaagtgatactttggatggttcagaatcaaatgatctcagatctttgaagaccacattacatcttgacctgagtaaaacaaatgagacaatttccactcaaaatgaaggctctaaggaatttgccagagacatccaggaaggctcgtggtgtcagctcaaagctgcaatagagcaggttattgaattgtttgataaagttgaaagagtggaaaatttgtacccaaatcggcagtctttaggtgaacaaaatccaaagtacaaaagtgaggaatttagtaggaaatttgaaaccatgtgcctttggctgaatgtgacaagagagttgtatcacaagctacatttaatagcaaagtttgttggtgtggatgtggttgaaacagaaacctggaaagattggattgaagttggccttggaaaattagatgatgtgtttcctgtatctgacctgagctggaacagagactgtgaagctggttccttatcaagtgatgattattacgacgatgacgttgatgatgatgatgatgatgatgatctcattgatgaaaatgacgatgatatttacgatggggatgtcaatgagagtgacgagaacaaagtagctgctcaaacaagcacccctacgtcgccacgcagaacagtttcctatgagtcccaatccagctcactttcccgaccttcaagaaccagcagcaacctttctggggttgctttgagttccacaacacgctacagaccatttgttgacctcagcatcaagaagatgggtttgattaagcttggaaaaagagtagggggcattttggactcaacaatgatgaaagccaggaggactctggcgcctcccttaacttgttcagcctgtgtttgtgatcagtgtcaacaccaagatacttcggttgaacagaggaaaatttcagtaaactatttagaaacacttttgaatgaacaaaatgaagaagtttcccagtcgccttgcagctgtcatcctcaccatgtcgtttgtcctgggctttggaagaatttggaagatcgcatttggaatgaagagtttgaacagggtggccttccatctttccgttctttgtacctatttttatgtcgtattccattggatataattcatgaatccttacgtctgagattacaacatcgtcctaaaggagagccttcctctttgagcgtcaggcagcttttacgggaatgtaaggatgtactgcttgcaggagttcttgtcaaagattactaccttgatcttgtggatggaatcgcaaacacagaagatttgagcaaggaaaaccctgaaagtgacattgagggatttgaacaggatcttcagagcttacttcaggtgtactttgaatatcttcacaatgtgatccacttggtacagagactaccccaggcatcaaaaggtcaaaaaaacattctggaagaggagtggaactttgtgaaaaaacactgtcgacatatccgagggggagaagtggaaggaggaactagattttgtgtaatggcttcaggcctgctgcagtcaactggtgatttcctggagtcagagctggaccagaattgttcagatctccataacaacactgatcagagtgatgatcttaggcgtaaggttctggaagcctgccgaggatttaaaaacctttttaatgaagcaagagaaagagcctccaaagcacttggatttgccaagaagctgacaagcgaccttgaaaatgctgcaaaatttagcattgatgtacctgtgtatgagttgttgatgagactggaagccagtggtcatgtacaggttgttgcaaggcacactgctggtcttatgatgtttgttccgagcacaatggccaaaaaaacatgccaaattattcacctgctgaattcctgctgtgttcaggaagaacttggtgaccaagttgtctctgacggtctggggtatctactaattatgtcatcccatgatgttgtaagtggcagtgaaaccccagtatcatggacgggcaagactgtcactgtgaatccaacaatggatactgccataggtttagctgacatacaggtgggtggtatgattctggtggtgcaaaactccaaggagttggatgtgcagcgtaagttgtttctggagagcatgagtttatctgtgaatattgtcaagccaaggacgtcaagtcaccaggccattgcagaagcattggaggagctgcaggatgcctgtatgtccttgcgtgaaggaattattagggccattgaaagagtagatgagaacttggaccttgacagcatgtttgacatggacgaaggagagaaggccattgtttaccagacttacacagaaaccatgcacttgtgttacaactttgcgtttgagtacctgaaagaggtggcacgacttgtaattggggccatgaaggatactcttgggcacagtatgcttgcatttgctcgccaatggatgacatttgtgacatcaaaatgtgaaaggggtagaggcacaaggccaagatgggcgaaccaaggtttagacttccttactgttgcctgtgatcccaagatgctgacctttatatccgagactaaatttcaggaattaaagaagcaaatcaatgcttgcatctgtcatgtgattggcagtgctgaaagctgcagtggacttactagccctgcatatcgttctcaaagcccagcttgttcatcgcctgtgtttggaagaggtggatctgcatcttcaggtttgtcaagggctatttcgtggccagtgggaaaacagcctaaatctccaggggacctaagtgatgtagacgaggctcatggtactcgtcggcaaatgtcagaccctgttttcaagcaacagtttcaaagtctggctgcagatgtcaaaaccaatgcagcaagcaatggtgaaggtgaaagtggggaagaagttgacaaagaaagtgggaaacataaagagagttttgtggcagaaccaggcactccatggctggagaaagtgcgtcactccttgaggaagatggagaccaaaagaaatgagtttttgtacaaaaagcatgtgattgggcgcatgagtaacagacgccgtgacattgtcaaagaactagcaagcatatcaaatagaaaggttccattcaagtggcagcgaggaaataagattggtgaaggccagtttgggaaagtttatgcttgtgttaatttagacactggagagatgatggctgtaaaacagatcaagtttcaaccaaatgatcatggcgaaatcagagaccttgctgatgaaataaaaaactttgaaggcatcaggcatgagagcttggtgaggtactatggtgttgaactacatagggatgagatgttcatttttatggagtactgtgctgatggtactatatcagatgtagcgaagcttgacctaccagaaaccatgatcagaaagtatacatatcaaatacttgttgctgtgagtgtgttgcatgagaaaggcattgttcacagagatattaaaggtgccaacatttttgtctcatctgatggttacatcaaactgggtgattttgggtcatcaatcaaactcaaaaatccctttcagaccaattatggagagataagcaacatgcgaggaacagttgcatacatggccccagaggtgattactttagacaaaggtgcgggatatggacgagctgccgacatctggagcattggatgcgtggtggttgaaatggcaactgggaagcctccctggccagattgcgacaataactatgtgataatgttcaaagttggcgaaggagcaacccctgatatcccagaaaatctaagtgaggagggtcaagatttccttctgtgttgcttcctgcatgatccatatgcacgacagacagctattgacttgatggatcatccatttgtcaagtgttgctga

Transcript

g15179.t1

atggcggaggaagATGCGTCTTCCCAGCTTCTAACAGGCTCTCCTTGCGATGAGATCGACCCAGCGGAACTGTTTGAAAGCGGTTTCGATATAGGAGCTGAAGGAGACCACGTGAATGACAGGGGTTCTGGTTCAGAATTCGACTCGGAGTGTGAGGATCAGGTGGATTTGTTTTCATCGGAGAACGATTTCTCCGATGACTTTCCAAGCCTAGAACTTGAGAGTTTTCCATACGGAGTCACACCGCCAAGAGATATCAGACGACAAAAGGAAAGACTGCGGAAGGAGAAAGAGAAGGTATCTAACGTTATAAAAGGACAATTTAGTCGCGAACTGCGTTCTAATCCCTCTGAAAAAGCGGAGTTGGATAGACGAAAAAAGCGGGGATCGGCTTTGTTGACAACGGAACGAGCATTCCGGAGAAGGATGAAAAGGGCCAGTGTTGATGCGATATCTTTTAATGGAATCGCGGATACTGCCAAATCGCTGGAAATTCCCAGTATTAAAATTGAATCAACTAGTCGGTTTATGTCACTGGACTGCGTTTGTGAAGACTCCACCGAATCTTTTGTTATTGAGGATCACGCGACCAACACAGGATCTATTCCTGTAAGACAGACAGTCGTGCGTGGCCATCCCAGGGCCACTCGCTCGGAATCTGACCCTCGTAGCTTCTCAGCTCGGAATTACGTTAATCCGAGTTGCCCAGAAGACAGAATGGATTTCTATAGAACGTTTTCTCTGCTAATTAAGCTAGGTTCACTGGCGCATAAACAGCAGGAGAGCCAGAAACAACAAATCCATAGCAGCAGTGTGGAAAGTCAGAGCTCGGAAGAGAACAAGAAATGGAAGGTCGAATTGTCACAAGCATTGTGGCTGGAGCTACAGGCATGGCATGCAAACAGATCTATGAGTGAGCAGGATCAATATCTCATGGTTGCACGTGCCAGTGTGAATGAGGTATTGGATGAAGTAATAAACTTCAAGGTTAAGATAGAAGGGAAAAGTTCTCATGTAATTGAGGACGGAAATGACATCAACTGCCAATCAGAAACAGTGACACTGGATGGCTCTTCTCAAGAAGAATCAACAGAGTTTATTGAGTTCACACATAACACTGAATGTGCCACAAACCTAACAAATGGTGAACAATTAACATTGTCAGATGGAAGTGATACTTTGGATGGTTCAGAATCAAATGATCTCAGATCTTTGAAGACCACATTACATCTTGACCTGAGTAAAACAAATGAGACAATTTCCACTCAAAATGAAGGCTCTAAGGAATTTGCCAGAGACATCCAGGAAGGCTCGTGGTGTCAGCTCAAAGCTGCAATAGAGCAGGTTATTGAATTGTTTGATAAAGTTGAAAGAGTGGAAAATTTGTACCCAAATCGGCAGTCTTTAGGTGAACAAAATCCAAAGTACAAAAGTGAGGAATTTAGTAGGAAATTTGAAACCATGTGCCTTTGGCTGAATGTGACAAGAGAGTTGTATCACAAGCTACATTTAATAGCAAAGTTTGTTGGTGTGGATGTGGTTGAAACAGAAACCTGGAAAGATTGGATTGAAGTTGGCCTTGGAAAATTAGATGATGTGTTTCCTGTATCTGACCTGAGCTGGAACAGAGACTGTGAAGCTGGTTCCTTATCAAGTGATGATTATTACGACGATgacgttgatgatgatgatgatgatgatgatctcaTTGATGAAAATGACGATGATATTTACGATGGGGATGTCAATGAGAGTGACGAGAACAAAGTAGCTGCTCAAACAAGCACCCCTACGTCGCCACGCAGAACAGTTTCCTATGAGTCCCAATCCAGCTCACTTTCCCGACCTTCAAGAACCAGCAGCAACCTTTCTGGGGTTGCTTTGAGTTCCACAACACGCTACAGACCATTTGTTGACCTCAGCATCAAGAAGATGGGTTTGATTAAGCTTGGAAAAAGAGTAGGGGGCATTTTGGACTCAACAATGATGAAAGCCAGGAGGACTCTGGCGCCTCCCTTAACTTGTTCAGCCTGTGTTTGTGATCAGTGTCAACACCAAGATACTTCGGTTGAACAGAGGAAAATTTCAGTAAACTATTTAGAAACACTTTTGAATGAACAAAATGAAGAAGTTTCCCAGTCGCCTTGCAGCTGTCATCCTCACCATGTCGTTTGTCCTGGGCTTTGGAAGAATTTGGAAGATCGCATTTGGAATGAAGAGTTTGAACAGGGTGGCCTTCCATCTTTCCGTTCTTTGTACCTATTTTTATGTCGTATTCCATTGGATATAATTCATGAATCCTTACGTCTGAGATTACAACATCGTCCTAAAGGAGAGCCTTCCTCTTTGAGCGTCAGGCAGCTTTTACGGGAATGTAAGGATGTACTGCTTGCAGGAGTTCTTGTCAAAGATTACTACCTTGATCTTGTGGATGGAATCGCAAACACAGAAGATTTGAGCAAGGAAAACCCTGAAAGTGACATTGAGGGATTTGAACAGGATCTTCAGAGCTTACTTCAGGTGTACTTTGAATATCTTCACAATGTGATCCACTTGGTACAGAGACTACCCCAGGCATCAAAAGGTCAAAAAAACATTCTGGAAGAGGAGTGGAACTTTGTGAAAAAACACTGTCGACATATCCGAGGGGGAGAAGTGGAAGGAGGAACTAGATTTTGTGTAATGGCTTCAGGCCTGCTGCAGTCAACTGGTGATTTCCTGGAGTCAGAGCTGGACCAGAATTGTTCAGATCTCCATAACAACACTGATCAGAGTGATGATCTTAGGCGTAAGGTTCTGGAAGCCTGCCGAGGATTTAAAAACCTTTTTAATGAAGCAAGAGAAAGAGCCTCCAAAGCACTTGGATTTGCCAAGAAGCTGACAAGCGACCTTGAAAATGCTGCAAAATTTAGCATTGATGTACCTGTGTATGAGTTGTTGATGAGACTGGAAGCCAGTGGTCATGTACAGGTTGTTGCAAGGCACACTGCTGGTCTTATGATGTTTGTTCCGAGCACAATGGCCAAAAAAACATGCCAAATTATTCACCTGCTGAATTCCTGCTGTGTTCAGGAAGAACTTGGTGACCAAGTTGTCTCTGACGGTCTGGGGTATCTACTAATTATGTCATCCCATGATGTTGTAAGTGGCAGTGAAACCCCAGTATCATGGACGGGCAAGACTGTCACTGTGAATCCAACAATGGATACTGCCATAGGTTTAGCTGACATACAGGTGGGTGGTATGATTCTGGTGGTGCAAAACTCCAAGGAGTTGGATGTGCAGCGTAAGTTGTTTCTGGAGAGCATGAGTTTATCTGTGAATATTGTCAAGCCAAGGACGTCAAGTCACCAGGCCATTGCAGAAGCATTGGAGGAGCTGCAGGATGCCTGTATGTCCTTGCGTGAAGGAATTATTAGGGCCATTGAAAGAGTAGATGAGAACTTGGACCTTGACAGCATGTTTGACATGGACGAAGGAGAGAAGGCCATTGTTTACCAGACTTACACAGAAACCATGCACTTGTGTTACAACTTTGCGTTTGAGTACCTGAAAGAGGTGGCACGACTTGTAATTGGGGCCATGAAGGATACTCTTGGGCACAGTATGCTTGCATTTGCTCGCCAATGGATGACATTTgtgacatcaaaatgtgaaaggGGTAGAGGCACAAGGCCaagATGGGCGAACCAAGGTTTAGACTTCCTTACTGTTGCCTGTGATCCCAAGATGCTGACCTTTATATCCGAGACTAAATTTCAGgaATTAAAGAAGCAAATCAATGCTTGCATCTGTCATGTGATTGGCAGTGCTGAAAGCTGCAGTGGACTTACTAGCCCTGCATATCGTTCTCAAAGCCCAGCTTGTTCATCGCCTGTGTTTGGAAGAGGTGGATCTGCATCTTCAGGTTTGTCAAGGGCTATTTCGTGGCCAGTGGGAAAACAGCCTAAATCTCCAGGGGACCTAAGTGATGTAGACGAGGCTCATGGTACTCGTCGGCAAATGTCAGACCCTGTTTTCAAGCAACAGTTTCAAAGTCTGGCTGCAGATGTCAAAACCAATGCAGCAAGCAATGGTGAAGGTGAAAGTGGGGAAGAAGTTGACAAAGAAAGTGGGAAACATAAAGAGAGTTTTGTGGCAGAACCAGGCACTCCATGGCTGGAGAAAGTGCGTCACTCCTTGAGGAAGATGGAGACCAAAAGAAATGAGTTTTTGTACAAAAAGCATGTGATTGGGCGCATGAGTAACAGACGCCGTGACATTGTCAAAGAACTAGCAAGCATATCAAATAGAAAGGTTCCATTCAAGTGGCAGCGAGGAAATAAGATTGGTGAAGGCCAGTTTGGGAAAGTTTATGCTTGTGTTAATTTAGACACTGGAGAGATGATGGCTGTAAAACAGATCAAGTTTCAACCAAATGATCATGGCGAAATCAGAGACCTTGctgatgaaataaaaaacttTGAAGGCATCAGGCATGAGAGCTTGGTGAGGTACTATGGTGTTGAACTACATAGGGATGAGATGTTCATTTTTATGGAGTACTGTGCTGATGGTACTATATCAGATGTAGCGAAGCTTGACCTACCAGAAACCATGATCAGAAAGTATACATATCAAATACTTGTTGCTGTGAGTGTGTTGCATGAGAAAGGCATTGTTCACAGAGATATTAAAGgTGCCAACATTTTTGTCTCATCTGATGGTTACATCAAACTGGGTGATTTTGGGTCATCAATCAAACTCAAAAATCCCTTTCAGACCAATTATGGAGAGATAAGCAACATGCGAGGAACAGTTGCATACATGGCCCCAGAGGTGATTACTTTAGACAAAGGTGCGGGATATGGACGAGCTGCCGACATCTGGAGCATTGGATGCGTGGTGGTTGAAATGGCAACTGGGAAGCCTCCCTGGCCAGATTGCGACAATAACTATGTGATAATGTTCAAAGTTGGCGAAGGAGCAACCCCTGATATCCCAGAAAATCTAAGTGAGGAGGGTCAAGATTTCCTTCTGTGTTGCTTCCTGCATGATCCATATGCACGACAGACAGCTATTGACTTGATGGATCATCCATTTGTCAAGtgttgctga

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y6R4	Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens OX=9606 GN=MAP3K4 PE=1 SV=2
O08648	Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map3k4 PE=1 SV=2
O14299	MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=wis4 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004248 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF19431 all species →	MEKK4_N	MEKK4 N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050538 all species →	Family	Mitogen-activated protein kinase kinase kinase	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR045801 all species →	Domain	Mitogen-activated protein kinase kinase kinase, N-terminal	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48016 all species →	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000165 all species →	Biological Process	MAPK cascade	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04428	MAP3K4, MEKK4; mitogen-activated protein kinase kinase kinase 4	EC:2.7.11.25	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g15179.t1 across 48 RNA-seq samples of Montipora capitata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

48TPM > 0

3Conditions

47.4Max TPM

24.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole organisms · ambient pH treatment	21	21	24.12	47.44
whole organisms · low pH treatment	15	15	25.69	45.43
whole organisms · extra low pH treatment pH treatment	12	12	24.96	38.91

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR11452263	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	47.44
SRR11452259	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	40.18
SRR11452250	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	37.95
SRR11452240	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	36.39
SRR11452254	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	36.25
SRR11452251	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	35.45
SRR11452260	whole organisms · ambient pH treatment	whole organisms	cleavage	ambient pH treatment	SRP254626	32.54
SRR11452246	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	32.02
SRR11452262	whole organisms · ambient pH treatment	whole organisms	egg	ambient pH treatment	SRP254626	30.09
SRR11452252	whole organisms · ambient pH treatment	whole organisms	prawn chip	ambient pH treatment	SRP254626	29.48
SRR11452217	whole organisms · ambient pH treatment	whole organisms	fertilized embryo	ambient pH treatment	SRP254626	23.07
SRR11452242	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	20.54
SRR11452243	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	19.39
SRR11452237	whole organisms · ambient pH treatment	whole organisms	gastrula	ambient pH treatment	SRP254626	16.48
SRR11452222	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	12.20
SRR11452233	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	11.61
SRR11452234	whole organisms · ambient pH treatment	whole organisms	morula	ambient pH treatment	SRP254626	11.31
SRR11452230	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	10.79
SRR11452232	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	10.27
SRR11452228	whole organisms · ambient pH treatment	whole organisms	planulae	ambient pH treatment	SRP254626	8.42
SRR11452231	whole organisms · ambient pH treatment	whole organisms	blastula	ambient pH treatment	SRP254626	4.73
SRR11452249	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	45.43
SRR11452247	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	43.87
SRR11452245	whole organisms · low pH treatment	whole organisms	prawn chip	low pH treatment	SRP254626	35.64
SRR11452229	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	31.64
SRR11452258	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	31.35
SRR11452253	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	29.11
SRR11452218	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	27.85
SRR11452255	whole organisms · low pH treatment	whole organisms	cleavage	low pH treatment	SRP254626	27.20
SRR11452216	whole organisms · low pH treatment	whole organisms	fertilized embryo	low pH treatment	SRP254626	26.59
SRR11452241	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	23.79
SRR11452236	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	20.66
SRR11452238	whole organisms · low pH treatment	whole organisms	gastrula	low pH treatment	SRP254626	19.97
SRR11452223	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	7.55
SRR11452224	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	7.54
SRR11452221	whole organisms · low pH treatment	whole organisms	planulae	low pH treatment	SRP254626	7.13
SRR11452248	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	38.91
SRR11452244	whole organisms · extra low pH treatment pH treatment	whole organisms	prawn chip	extra low pH treatment pH treatment	SRP254626	36.92
SRR11452257	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	34.84
SRR11452219	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	30.93
SRR11452239	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	29.32
SRR11452220	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	26.67
SRR11452261	whole organisms · extra low pH treatment pH treatment	whole organisms	fertilized embryo	extra low pH treatment pH treatment	SRP254626	26.37
SRR11452256	whole organisms · extra low pH treatment pH treatment	whole organisms	cleavage	extra low pH treatment pH treatment	SRP254626	26.01
SRR11452235	whole organisms · extra low pH treatment pH treatment	whole organisms	gastrula	extra low pH treatment pH treatment	SRP254626	19.86
SRR11452225	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	10.72
SRR11452227	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	10.27
SRR11452226	whole organisms · extra low pH treatment pH treatment	whole organisms	planulae	extra low pH treatment pH treatment	SRP254626	8.74

Source: CnidoSite RNA-seq expression matrices (MCAPI_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.