Detailed information of g1522.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: VDH93503.1, Hypothetical predicted protein [Mytilus galloprovincialis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6H8Q1Actin-binding LIM protein 2 OS=Homo sapiens OX=9606 GN=ABLIM2 PE=1 SV=2
Q8BL65Actin-binding LIM protein 2 OS=Mus musculus OX=10090 GN=Ablim2 PE=1 SV=1
Q6KC51Actin-binding LIM protein 2 OS=Rattus norvegicus OX=10116 GN=Ablim2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan
PF00892EamAEamA-like transporter familyFamilyInterproscan
PF02209VHPVillin headpiece domainDomainInterproscan
PF18802CxC1CxC1 like cysteine cluster associated with KDZ transposasesDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF04500FLYWCHFLYWCH zinc finger domainDomainInterproscan
PF00130C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF10191COG7Golgi complex component 7 (COG7)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006073DomainGTP binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR000620DomainEamA domainInterproscan
IPR036886Homologous_superfamilyVillin headpiece domain superfamilyInterproscan
IPR003128DomainVillin headpieceInterproscan
IPR051618FamilyActin-binding LIMInterproscan
IPR051227FamilyChondroitin sulfate glycosyltransferaseInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR041320DomainCxC1-like cysteine cluster associated with KDZ transposasesInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR050969FamilyDevelopmental Signaling ModulatorsInterproscan
IPR007588DomainZinc finger, FLYWCH-typeInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR002219DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR046349Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR051025FamilyRho GTPase-activatingInterproscan
IPR019335FamilyConserved oligomeric Golgi complex subunit 7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23305OBG GTPASE FAMILYInterproscan
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan
PTHR22911ACYL-MALONYL CONDENSING ENZYME-RELATEDInterproscan
PTHR24213ACTIN-BINDING LIM PROTEINInterproscan
PTHR12369CHONDROITIN SYNTHASEInterproscan
PTHR33096CXC2 DOMAIN-CONTAINING PROTEINInterproscan
PTHR14949EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan
PTHR15228SPERMATHECAL PHYSIOLOGY VARIANTInterproscan
PTHR21443CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0030032Biological Processlamellipodium assemblyInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0008376Molecular Functionacetylgalactosaminyltransferase activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0090630Biological Processactivation of GTPase activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0017119Cellular ComponentGolgi transport complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20294COG7; conserved oligomeric Golgi complex subunit 7-Chromosome and associated proteinsko03036deepkoala
Membrane traffickingko04131deepkoala

TOP