Gene detail

Detailed information of g1523.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: ABU92523.1, POU class 6 [Eleutheria dichotoma]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HAB8	Phosphopantothenate--cysteine ligase OS=Homo sapiens OX=9606 GN=PPCS PE=1 SV=2
Q8VDG5	Phosphopantothenate--cysteine ligase OS=Mus musculus OX=10090 GN=Ppcs PE=1 SV=1
Q9USK7	Uncharacterized protein C4B3.18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4B3.18 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000129 (this species only)
Orthogroup (gene family)	OG0000147 (this species only)
Orthogroup (gene family)	OG0001257 (this species only)
Orthogroup (gene family)	OG0001278 (this species only)
Orthogroup (gene family)	OG0002330 (this species only)
Orthogroup (gene family)	OG0002671 (this species only)
Orthogroup (gene family)	OG0006406 (this species only)
Orthogroup (gene family)	OG0006518 (this species only)
Orthogroup (gene family)	OG0006627 (this species only)
Orthogroup (gene family)	OG0007174 (this species only)
Orthogroup (gene family)	OG0017063 (this species only)
Orthogroup (gene family)	OG0048278 (this species only)
Orthogroup (gene family)	OG0171178 (this species only)
Transcription factor family	Homeobox · all TF in this species
Transcription factor family	Pou · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan
PF00157 all species →	Pou	Pou domain - N-terminal to homeobox domain	Domain	Interproscan
PF04127 all species →	DFP	DNA / pantothenate metabolism flavoprotein	Family	Interproscan
PF00082 all species →	Peptidase_S8	Subtilase family	Domain	Interproscan
PF17917 all species →	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00106 all species →	adh_short	short chain dehydrogenase	Domain	Interproscan
PF02214 all species →	BTB_2	BTB/POZ domain	Domain	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF00685 all species →	Sulfotransfer_1	Sulfotransferase domain	Domain	Interproscan
PF03006 all species →	HlyIII	Haemolysin-III related	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000327 all species →	Domain	POU-specific domain	Interproscan
IPR017970 all species →	Conserved_site	Homeobox, conserved site	Interproscan
IPR013847 all species →	Domain	POU domain	Interproscan
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR010982 all species →	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan
IPR050255 all species →	Family	POU domain transcription factor	Interproscan
IPR035929 all species →	Homologous_superfamily	CoaB-like superfamily	Interproscan
IPR007085 all species →	Domain	DNA/pantothenate metabolism flavoprotein, C-terminal	Interproscan
IPR000209 all species →	Domain	Peptidase S8/S53 domain	Interproscan
IPR036852 all species →	Homologous_superfamily	Peptidase S8/S53 domain superfamily	Interproscan
IPR023827 all species →	Active_site	Peptidase S8, subtilisin, Asp-active site	Interproscan
IPR041373 all species →	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR020904 all species →	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR051019 all species →	Family	VLCFA Elongation and Steroid Dehydrogenase	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR003131 all species →	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan
IPR003972 all species →	Family	Potassium channel, voltage dependent, Kv1	Interproscan
IPR003968 all species →	Family	Potassium channel, voltage dependent, Kv	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR042318 all species →	Family	Consortin	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR037359 all species →	Family	Heparan sulfate sulfotransferase	Interproscan
IPR000863 all species →	Domain	Sulfotransferase domain	Interproscan
IPR004254 all species →	Family	AdipoR/Haemolysin-III-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11636 all species →	POU DOMAIN	Interproscan
PTHR42884 all species →	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED	Interproscan
PTHR34072 all species →	ENZYMATIC POLYPROTEIN-RELATED	Interproscan
PTHR43899 all species →	RH59310P	Interproscan
PTHR11537 all species →	VOLTAGE-GATED POTASSIUM CHANNEL	Interproscan
PTHR28581 all species →	CONSORTIN	Interproscan
PTHR10605 all species →	HEPARAN SULFATE SULFOTRANSFERASE	Interproscan
PTHR20855 all species →	ADIPOR/PROGESTIN RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016485 all species →	Biological Process	protein processing	Interproscan
GO:0030173 all species →	Cellular Component	obsolete integral component of Golgi membrane	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0051260 all species →	Biological Process	protein homooligomerization	Interproscan
GO:0005249 all species →	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan
GO:0008076 all species →	Cellular Component	voltage-gated potassium channel complex	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0030133 all species →	Cellular Component	transport vesicle	Interproscan
GO:0042998 all species →	Biological Process	positive regulation of Golgi to plasma membrane protein transport	Interproscan
GO:0071253 all species →	Molecular Function	connexin binding	Interproscan
GO:0008146 all species →	Molecular Function	sulfotransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01922	PPCS, COAB; phosphopantothenate---cysteine ligase (ATP)	EC:6.3.2.51	Pantothenate and CoA biosynthesis	ko00770	deepkoala
K08104	HS3ST5; [heparan sulfate]-glucosamine 3-sulfotransferase 5	EC:2.8.2.23	Glycosyltransferases	ko01003	deepkoala
K10251	HSD17B12, KAR, IFA38; 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase	EC:1.1.1.62 EC:1.1.1.330	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.