Detailed information of g1524.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAA57211.1, hox1 [Podocoryna carnea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q08821Homeobox protein Hox-A1 (Fragment) OS=Xenopus laevis OX=8355 GN=hoxa1 PE=2 SV=1
P09022Homeobox protein Hox-A1 OS=Mus musculus OX=10090 GN=Hoxa1 PE=1 SV=2
P49639Homeobox protein Hox-A1 OS=Homo sapiens OX=9606 GN=HOXA1 PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02245Pur_DNA_glycoMethylpurine-DNA glycosylase (MPG)DomainInterproscan
PF02460PatchedPatched familyFamilyInterproscan
PF02214BTB_2BTB/POZ domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00689Cation_ATPase_CCation transporting ATPase, C-terminusFamilyInterproscan
PF00079SerpinSerpin (serine protease inhibitor)DomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF00005ABC_tranABC transporterDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR003180FamilyMethylpurine-DNA glycosylaseInterproscan
IPR011034Homologous_superfamilyFormyl transferase-like, C-terminal domain superfamilyInterproscan
IPR036995Homologous_superfamilyMethylpurine-DNA glycosylase superfamilyInterproscan
IPR044288FamilyE3 ubiquitin-protein ligase ZNF598/Hel2Interproscan
IPR033370FamilyConserved oligomeric Golgi complex subunit 1Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR033467DomainTesmin/TSO1-like CXC domainInterproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR003972FamilyPotassium channel, voltage dependent, Kv1Interproscan
IPR003968FamilyPotassium channel, voltage dependent, KvInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR006068DomainCation-transporting P-type ATPase, C-terminalInterproscan
IPR023298Homologous_superfamilyP-type ATPase, transmembrane domain superfamilyInterproscan
IPR042178Homologous_superfamilySerpin superfamily, domain 1Interproscan
IPR042185Homologous_superfamilySerpin superfamily, domain 2Interproscan
IPR000215FamilySerpin familyInterproscan
IPR036186Homologous_superfamilySerpin superfamilyInterproscan
IPR023796DomainSerpin domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR046327FamilyHomeobox protein Hox-A1/B1/D1Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051921FamilyABC transporter osmolyte uptake ATP-binding proteinInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22938ZINC FINGER PROTEIN 598Interproscan
PTHR31658CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1Interproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR11461SERINE PROTEASE INHIBITOR, SERPINInterproscan
PTHR45946HOMEOBOX PROTEIN ROUGH-RELATEDInterproscan
PTHR43869GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROVInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003905Molecular Functionalkylbase DNA N-glycosylase activityInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0017119Cellular ComponentGolgi transport complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015918Biological Processsterol transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0004867Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02000proV; glycine betaine/proline transport system ATP-binding proteinEC:7.6.2.9
Peptidases and inhibitorsko01002deepkoala
Transportersko02000deepkoala
Ion channelsko04040deepkoala
Transportersko02000deepkoala

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