Detailed information of g1532.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAF2134587.1, unnamed protein product [Rotaria magnacalcarata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
P08183ATP-dependent translocase ABCB1 OS=Homo sapiens OX=9606 GN=ABCB1 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00611FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF04153NOT2_3_5_CNOT2/NOT3/NOT5 C-terminalDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF00278Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan
PF00561Abhydrolase_1alpha/beta hydrolase foldDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF00005ABC_tranABC transporterDomainInterproscan
PF00567TUDORTudor domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00012HSP70Hsp70 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR031160DomainF-BAR domainInterproscan
IPR001060DomainFCH domainInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR038635Homologous_superfamilyCCR4-NOT complex subunit 2/3/5, C-terminal domain superfamilyInterproscan
IPR007282DomainNOT2/NOT3/NOT5, C-terminalInterproscan
IPR040168FamilyNot2/Not3/Not5Interproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR009006Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR022657Conserved_siteOrn/DAP/Arg decarboxylase 2, conserved siteInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR000183FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR022643DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR045075FamilyPre-mRNA-splicing factor Syf1-likeInterproscan
IPR012020FamilyAB hydrolase 4 familyInterproscan
IPR050960FamilyAB hydrolase superfamily, subfamily 4Interproscan
IPR000073DomainAlpha/beta hydrolase fold-1Interproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR039421FamilyType 1 protein exporterInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002999DomainTudor domainInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR050451FamilyHeat Shock Protein 70 (HSP70)Interproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR013126FamilyHeat shock protein 70 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15735FCH AND DOUBLE SH3 DOMAINS PROTEINInterproscan
PTHR23326CCR4 NOT-RELATEDInterproscan
PTHR24240OPSINInterproscan
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan
PTHR11246PRE-MRNA SPLICING FACTORInterproscan
PTHR10794ABHYDROLASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43394ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIALInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45639HSC70CB, ISOFORM G-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:2000036Biological Processregulation of stem cell population maintenanceInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0001750Cellular Componentphotoreceptor outer segmentInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000349Biological Processgeneration of catalytic spliceosome for first transesterification stepInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0071007Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan
GO:0008126Molecular Functionacetylesterase activityInterproscan
GO:0034338Molecular Functionshort-chain carboxylesterase activityInterproscan
GO:0036126Cellular Componentsperm flagellumInterproscan
GO:0043401Biological Processsteroid hormone receptor signaling pathwayInterproscan
GO:0044255Biological Processobsolete cellular lipid metabolic processInterproscan
GO:0046464Biological Processacylglycerol catabolic processInterproscan
GO:0047372Molecular Functionmonoacylglycerol lipase activityInterproscan
GO:0048240Biological Processsperm capacitationInterproscan
GO:0051792Biological Processmedium-chain fatty acid biosynthetic processInterproscan
GO:0051793Biological Processmedium-chain fatty acid catabolic processInterproscan
GO:0097524Cellular Componentsperm plasma membraneInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0015421Molecular FunctionABC-type oligopeptide transporter activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01581E4.1.1.17, ODC1, speC, speF; ornithine decarboxylaseEC:4.1.1.17
CD moleculesko04090deepkoala
Cilium and associated proteinsko03037deepkoala
Efferocytosisko04148deepkoala

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