Gene detail

Detailed information of g1534.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: CAH3188900.1, unnamed protein product [Porites evermanni]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P25228	Ras-related protein Rab-3 OS=Drosophila melanogaster OX=7227 GN=Rab3 PE=1 SV=1
P10949	Ras-related protein Rab-3C OS=Bos taurus OX=9913 GN=RAB3C PE=1 SV=3
P62823	Ras-related protein Rab-3C OS=Mus musculus OX=10090 GN=Rab3c PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000048 (this species only)
Orthogroup (gene family)	OG0000137 (this species only)
Orthogroup (gene family)	OG0000431 (this species only)
Orthogroup (gene family)	OG0000447 (this species only)
Orthogroup (gene family)	OG0000571 (this species only)
Orthogroup (gene family)	OG0004740 (this species only)
Orthogroup (gene family)	OG0012796 (this species only)
Orthogroup (gene family)	OG0014658 (this species only)
Orthogroup (gene family)	OG0015706 (this species only)
Orthogroup (gene family)	OG0025851 (this species only)
Orthogroup (gene family)	OG0031534 (this species only)
Orthogroup (gene family)	OG0172029 (this species only)
Orthogroup (gene family)	OG0173823 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03982 all species →	DAGAT	Diacylglycerol acyltransferase	Family	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF01753 all species →	zf-MYND	MYND finger	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF08029 all species →	HisG_C	HisG, C-terminal domain	Domain	Interproscan
PF01634 all species →	HisG	ATP phosphoribosyltransferase	Family	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR002893 all species →	Domain	Zinc finger, MYND-type	Interproscan
IPR007130 all species →	Family	Diacylglycerol acyltransferase	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR052035 all species →	Family	Zinc finger BED domain-containing	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR052577 all species →	Family	von Willebrand factor A domain-containing protein 7	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR015867 all species →	Homologous_superfamily	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	Interproscan
IPR020621 all species →	Family	ATP phosphoribosyltransferase HisG, long form	Interproscan
IPR013115 all species →	Domain	Histidine biosynthesis HisG, C-terminal	Interproscan
IPR013820 all species →	Domain	ATP phosphoribosyltransferase, catalytic domain	Interproscan
IPR018198 all species →	Conserved_site	ATP phosphoribosyltransferase, conserved site	Interproscan
IPR011322 all species →	Homologous_superfamily	Nitrogen regulatory PII-like, alpha/beta	Interproscan
IPR001348 all species →	Family	ATP phosphoribosyltransferase HisG	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR050305 all species →	Family	Small GTPase superfamily, Rab	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12317 all species →	DIACYLGLYCEROL O-ACYLTRANSFERASE	Interproscan
PTHR46481 all species →	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4	Interproscan
PTHR14905 all species →	NG37	Interproscan
PTHR24246 all species →	OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR	Interproscan
PTHR21403 all species →	ATP PHOSPHORIBOSYLTRANSFERASE ATP-PRTASE	Interproscan
PTHR47980 all species →	LD44762P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004144 all species →	Molecular Function	diacylglycerol O-acyltransferase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0019432 all species →	Biological Process	triglyceride biosynthetic process	Interproscan
GO:0008374 all species →	Molecular Function	O-acyltransferase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0000105 all species →	Biological Process	L-histidine biosynthetic process	Interproscan
GO:0003879 all species →	Molecular Function	ATP phosphoribosyltransferase activity	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006904 all species →	Biological Process	vesicle docking involved in exocytosis	Interproscan
GO:0008021 all species →	Cellular Component	synaptic vesicle	Interproscan
GO:0009306 all species →	Biological Process	protein secretion	Interproscan
GO:0017157 all species →	Biological Process	regulation of exocytosis	Interproscan
GO:0031489 all species →	Molecular Function	myosin V binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00765	hisG; ATP phosphoribosyltransferase	EC:2.4.2.17	Histidine metabolism	ko00340	deepkoala
K07883	RAB3C; Ras-related protein Rab-3C	-	GTP-binding proteins	ko04031	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.