Gene detail

Detailed information of g1536.t1 in Tripedalia maipoensis

Genomic Location: scaffold_10:6368594...6374771
NR annotation: no NCBI-NR hit recorded
Species Tripedalia maipoensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00203 all species →	Ribosomal_S19	Ribosomal protein S19	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020934 all species →	Conserved_site	Small ribosomal subunit protein uS19, conserved site	Interproscan
IPR005713 all species →	Family	Small ribosomal subunit protein uS19, eukaryotic/archaeal	Interproscan
IPR002222 all species →	Family	Small ribosomal subunit protein uS19	Interproscan
IPR023575 all species →	Homologous_superfamily	Small ribosomal subunit protein uS19, superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11880 all species →	RIBOSOMAL PROTEIN S19P FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02958	RP-S15e, RPS15; small subunit ribosomal protein S15e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.