Detailed information of g1545.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047145209.1, calcium-responsive transcription factor-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8N187Calcium-responsive transcription factor OS=Homo sapiens OX=9606 GN=CARF PE=1 SV=2
D4A7U2Calcium-responsive transcription factor OS=Rattus norvegicus OX=10116 GN=Carf PE=1 SV=1
Q58CW6Calcium-responsive transcription factor OS=Bos taurus OX=9913 GN=CARF PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF02244Propep_M14Carboxypeptidase activation peptideDomainInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024861FamilyDonsonInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR034330DomainGlutathione S-transferases, class Zeta , C-terminalInterproscan
IPR010987DomainGlutathione S-transferase, C-terminal-likeInterproscan
IPR024862FamilyTransient receptor potential cation channel subfamily VInterproscan
IPR005821DomainIon transport domainInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR009145FamilyU2 auxiliary factor small subunitInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR003146DomainCarboxypeptidase, activation peptideInterproscan
IPR036990Homologous_superfamilyMetallocarboxypeptidase-like, propeptideInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12972DOWNSTREAM NEIGHBOR OF SONInterproscan
PTHR42673MALEYLACETOACETATE ISOMERASEInterproscan
PTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINInterproscan
PTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITInterproscan
PTHR14694CALCIUM-RESPONSIVE TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033260Biological Processnuclear DNA replicationInterproscan
GO:0004364Molecular Functionglutathione transferase activityInterproscan
GO:0006559Biological ProcessL-phenylalanine catabolic processInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0016034Molecular Functionmaleylacetoacetate isomerase activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0089701Cellular ComponentU2AF complexInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0030628Molecular Functionpre-mRNA 3'-splice site bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24273ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein-DNA repair and recombination proteinsko03400deepkoala
Spliceosomeko03041deepkoala

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